Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g00123 ATGGGAGAACATGAAGGGTGGGCACAGCCACCAAGTGGGCTATTGCCAAATGGTTTGTTGCCCAATGAAGCTGCCTCCGTGATACAGGTGCTTGACTCGGAGCGGTGGTTGAAAGCCGAGCAAAGGACTGCAGAGCTGATTGCCTGCATTCAGCCTAATCCACCCTCCGAGGAGCGCCGGAATGCGGTTGCTGACTATGTCCAACGGCTGATCATGAAGTGCTTCCCTTGCCAGGTGTTCACCTTTGGGTCGGTTCCCCTTAAAACTTATTTGCCTGATGGAGATATTGACTTAACAGCATTCAGTAAGAATCAAAATCTGAAGGAGACATGGGCACATCAGGTTCGTGACATGCTGGAGAATGAGGAGAAGAATGAGAATGCAGAGTTTCATGTCAAGGAGGTTCAGTACATCCAGGCCGAAGTAAAAATTATAAAGTGTCTCGTTGAGAATATTGTAGTAGACATTTCATTTAACCAGCTTGGAGGTTTGTGTACCCTATGTTTTCTTGAGGAGGTTGATAATCTGATTAATCAAAATCATTTATTCAAGCGTAGTATTATCCTTATAAAGGCTTGGTGTTACTATGAGAGCCGAATACTCGGTGCCCACCATGGACTTATCTCAACTTATGCTTTAGAGACCTTGGTTCTTTACATTTTTCATGTTTACAACAATTCTTTTGCCGGACCACTTGAGGTGTTGTATCGATTTTTGGAATTCTTTAGTAAGTTTGACTGGGATAATTTCTGTGTAAGTCTATGGGGCCCAGTACCTATTAGTTCACTCCCAGATGTGACAGCTGAACCTCCTCGAAAAGATGGTGGAGATTTACTACTCAGCAAGTTATTTCTCGATGCCTGTAGCTCAGTTTATGCTGTTTTCCCTGGTGGCCAAGAAAATCAGGGGCAACCATTTGTTTCCAAGCATTTCAATGTTATTGATCCTTTGCGTGTCAACAATAACCTTGGTCGTAGTGTCAGCAAAGGTAATTTCTTTAGGATACGCAGTGCCTTTGCATTTGGGGCAAAAAGGCTAGCTAGATTACTTGATTGCCCCGAGGAGGAATTATTTTCTGAGGTGAATCAGTTCTTTTTGAACACTTGGGACAGACATGGAAGTGGGGAAAGGCCTGATGTTCCAACCATTGACTTACAGCGGTTGAGTTTATCCAGTCATGACCAATTACAGAGGTCTGACAATCTCCGGAACAATAACCATAAAATTGATAACGCTTCTAATCATGAATCAACTGAAGGTGAACGTGTCTCACAAAGTGTTTTATCTCAGTATAGTAATTTATTATCTGGAAAGACATCTGGAAGTGTTGTTTCTGCAGTGGCACATACTCAGAATCAAAAGAGTTATGGAAACCAAAATAATTCAAGGACCTTTGATCATGTTAGGCGGGAAACTAATTCTAATCAAGGTACTCATTTTGATAAAGGTCAGAGAAATGTTAAAGCTGATAACCTAGTTGGTGATGTTCAGGGAAGGTTTCTGTTTGCCAGGACACGTTCTAGCCCTGAGCTGACAGACTCATATGGTGATGTTCCAATCCAAGGAAGACATACAAAAGCAACAGAAAGTAGTAAAGGCCAGAGTGCCTTTGTGAAGTTGGAAAATAGTCGAAGGAAGAACATTGAACCTGATGTAGCTGTAAGAATGGATGAGTCATCTGTAAGGCACATTTCATCTCATCGATTTCTTGAAAATGTTGCTGATTCAAACAGTAATCATGATGATTCAAGCTCAGGTGTAATGGGAGAAGAGTTTGCACCTGTTTCTGGTGCAGTTGGAATGCAGATGATGCATCAAGAGGAGCAGGACCTTTTGAATATGATGGCATCTCCCACAGCTCAGGGTTTCAGTGGTCAGAATCATGTGCCTATGAATATTGCACCTGGTCACCTACCATTTCACTTTCCACCTTCCATTCTTGCGTCAATGGGATATACTCAGAGAAACACGGGTAACATTCCCTTTATCGAGGCTCCTTGGGGTGCAAATATGCAATTTCCTCAAGGTTTCATCCCGCCTTTGACTCCTTATTTCCCTGGCATAGGAATGGCCTCAAATCCTCAAGATTTACTTGAAACTAACCATGAAAATTTCAATTCAGTTGAGGCGAATGTAACAGAAGCTGATGACTATTGGCATGAGCAGGAAAGGAGTTCTGCAAGTGAGGTTGAAGTTGATAATGGAAATCTCGAAATGGCCCAAGAAGATAGGCAACAGTCTACTTCAGGTAGTTACAACTCTGCCCCGTCATCTCAGGTAGGCAGCTCCAACAGTAACAGTTCTGCTGGAGTTCAGCAGAAGTTTACTAAAGAAAACCGAGGGTCAACCAGAGAAGAGCATATTGACAATTTTCAATTTCAAGATGGCCGAAGAAATGAAGTTTATTTTGATGATAGAATTGCAATTTCAGAGTTATCCAGTGCACCTCCTTCGAGCTCCTTCAGGAGTAGGACCCCTTCTGAAAGCTCTTGGGATGGATCATCAGTCAAATCCTCAAAATCAACGAGGGAGAGAAGGGGGAGAAAAAACACTCCCTCAGTGCCATCTCAAAATCCTGTTTATGGGAAGGGTAAGAATGTTTCAGAAAATTCATCTAATCAAGTGGATGATGAAAACAGAGAGTGGACTCCTTTGTCAACGGTTCCATCTGACATGCCAGAAAGAGGCACTTGGCCCACATCTGGTACTTCCATACATGTTCCAAGGAATCAAATATCTAGTTTTGAAACTGCTCAGACTAGTGGACCAGATTCTCCATTACCTATAGCTCCAGTGGTTATAGGTCCTGGTTCTCGCCCAAGAGCAGTTGATAATTCTGGGGTTCTTCCGTTTACATTCTATCCTACAGGGCCACCTGTTCCCTTTGTTACCATGCTTCCTTTATATAATTTTCCAACTGAGTCTTCTGACACTTCAACAAGCAACTTCAATGTGGAAGAAGGGGCAGATAACAGTGATTCAAGTCAGAATTTTGATTCATCTGAGGGATATGAACACCCTGAGGTGTCAAGCCCTTCCAATTCTATGGCAAGGGTGGCTATGGAGTCATCAGAGCACAAGCCTGACATTCTTAATAGTGACTTTGTTAGTCACTGGCAAAATTTGCAATATGGCCGATTTTGTCAAAACACGCGTCATCCGCCTTCAGTGATCTATCCTTCACCTGTTATGGTGCCTCCTGTTTATTTGCAGGGCCGATATCCTTGGGATGGTCCTGGAAGACCTATTTCTGGTAACATGAATATTTTTAGTCAGCTTATGAGCTATGGGCCACGTCTGGTTCCGGTTGCTCCTCTCCAGTCAGTTTCTAATAGACCTACCAATATTTACCAACGTTATGTAGATGATATGCCACGGTATAGAAGTGGGACTGGAACCTACCTGCCAAATCCGAAGGTGTCTCCTCGGGATCGACATTCAACAAGTACCAGAAGGGGAAGTTACAATTATGATAGAAGTGACCATCATGGTGACAGAGAAGGGAACTGGAATACTAACTCAAAATTGCGAGGAACTGGACGGGGCCATAATCGCAACCAAATGGAGAAGTCCAACTCAAAGCCAGAGCGGTTGTCTACTACCAGTGAGAGCCGTGCAGAGAGACCATGGAGTTCACATAGGCATGACAACTTCATTCCTCACCAGAATGGTCCAGTTCGCTCAAATTCCTCACAGAGTAATTCTTCCAATGTAACTTATGGAATGTATCCTATACCGGCCATGAACCCAAGTGGTGTCTCATCAAATGGTCCAATGCAATCTGTTGTAATGTTTTATCCTTTTGATCATAATTCTGGCTTCGTACCAGAAGAGCAGCTTGAGTTTGGGACTTTGGGACCAATGGGGTTCTCAGGTGTCAATGAACTGTCACAGGCAAATGAGGGAAGTCAATCTAGTGTAGCACATGAAGAGCAAAGGTTTCGTGGTGGTCACACCCAACGATCTTCACCAGATCAACCCTCCTCACCTCATGTCTCAAGTTTTATGGTTGTCAACAGGGCTCCCTGA 4029 0.4336 MGEHEGWAQPPSGLLPNGLLPNEAASVIQVLDSERWLKAEQRTAELIACIQPNPPSEERRNAVADYVQRLIMKCFPCQVFTFGSVPLKTYLPDGDIDLTAFSKNQNLKETWAHQVRDMLENEEKNENAEFHVKEVQYIQAEVKIIKCLVENIVVDISFNQLGGLCTLCFLEEVDNLINQNHLFKRSIILIKAWCYYESRILGAHHGLISTYALETLVLYIFHVYNNSFAGPLEVLYRFLEFFSKFDWDNFCVSLWGPVPISSLPDVTAEPPRKDGGDLLLSKLFLDACSSVYAVFPGGQENQGQPFVSKHFNVIDPLRVNNNLGRSVSKGNFFRIRSAFAFGAKRLARLLDCPEEELFSEVNQFFLNTWDRHGSGERPDVPTIDLQRLSLSSHDQLQRSDNLRNNNHKIDNASNHESTEGERVSQSVLSQYSNLLSGKTSGSVVSAVAHTQNQKSYGNQNNSRTFDHVRRETNSNQGTHFDKGQRNVKADNLVGDVQGRFLFARTRSSPELTDSYGDVPIQGRHTKATESSKGQSAFVKLENSRRKNIEPDVAVRMDESSVRHISSHRFLENVADSNSNHDDSSSGVMGEEFAPVSGAVGMQMMHQEEQDLLNMMASPTAQGFSGQNHVPMNIAPGHLPFHFPPSILASMGYTQRNTGNIPFIEAPWGANMQFPQGFIPPLTPYFPGIGMASNPQDLLETNHENFNSVEANVTEADDYWHEQERSSASEVEVDNGNLEMAQEDRQQSTSGSYNSAPSSQVGSSNSNSSAGVQQKFTKENRGSTREEHIDNFQFQDGRRNEVYFDDRIAISELSSAPPSSSFRSRTPSESSWDGSSVKSSKSTRERRGRKNTPSVPSQNPVYGKGKNVSENSSNQVDDENREWTPLSTVPSDMPERGTWPTSGTSIHVPRNQISSFETAQTSGPDSPLPIAPVVIGPGSRPRAVDNSGVLPFTFYPTGPPVPFVTMLPLYNFPTESSDTSTSNFNVEEGADNSDSSQNFDSSEGYEHPEVSSPSNSMARVAMESSEHKPDILNSDFVSHWQNLQYGRFCQNTRHPPSVIYPSPVMVPPVYLQGRYPWDGPGRPISGNMNIFSQLMSYGPRLVPVAPLQSVSNRPTNIYQRYVDDMPRYRSGTGTYLPNPKVSPRDRHSTSTRRGSYNYDRSDHHGDREGNWNTNSKLRGTGRGHNRNQMEKSNSKPERLSTTSESRAERPWSSHRHDNFIPHQNGPVRSNSSQSNSSNVTYGMYPIPAMNPSGVSSNGPMQSVVMFYPFDHNSGFVPEEQLEFGTLGPMGFSGVNELSQANEGSQSSVAHEEQRFRGGHTQRSSPDQPSSPHVSSFMVVNRAP 1342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g00123 1342 MobiDBLite consensus disorder prediction 1293 1310 - -
Vimu9g00123 1342 MobiDBLite consensus disorder prediction 974 1020 - -
Vimu9g00123 1342 MobiDBLite consensus disorder prediction 1216 1237 - -
Vimu9g00123 1342 MobiDBLite consensus disorder prediction 1144 1170 - -
Vimu9g00123 1342 PANTHER PAP/OAS1 SUBSTRATE-BINDING DOMAIN SUPERFAMILY 16 1332 - -
Vimu9g00123 1342 MobiDBLite consensus disorder prediction 893 907 - -
Vimu9g00123 1342 SUPERFAMILY PAP/OAS1 substrate-binding domain 182 352 - -
Vimu9g00123 1342 MobiDBLite consensus disorder prediction 778 792 - -
Vimu9g00123 1342 MobiDBLite consensus disorder prediction 974 1024 - -
Vimu9g00123 1342 FunFam PAP/OAS1 substrate-binding domain superfamily 52 161 - -
Vimu9g00123 1342 MobiDBLite consensus disorder prediction 741 777 - -
Vimu9g00123 1342 MobiDBLite consensus disorder prediction 1293 1342 - -
Vimu9g00123 1342 MobiDBLite consensus disorder prediction 741 792 - -
Vimu9g00123 1342 MobiDBLite consensus disorder prediction 513 537 - -
Vimu9g00123 1342 MobiDBLite consensus disorder prediction 400 417 - -
Vimu9g00123 1342 MobiDBLite consensus disorder prediction 1121 1237 - -
Vimu9g00123 1342 MobiDBLite consensus disorder prediction 851 886 - -
Vimu9g00123 1342 MobiDBLite consensus disorder prediction 1319 1335 - -
Vimu9g00123 1342 Gene3D Beta Polymerase, domain 2 52 161 IPR043519 -
Vimu9g00123 1342 FunFam PAP/OAS1 substrate-binding domain superfamily 162 358 - -
Vimu9g00123 1342 MobiDBLite consensus disorder prediction 392 425 - -
Vimu9g00123 1342 MobiDBLite consensus disorder prediction 813 907 - -
Vimu9g00123 1342 CDD NT_PAP_TUTase 59 166 - -
Vimu9g00123 1342 MobiDBLite consensus disorder prediction 813 837 - -
Vimu9g00123 1342 SUPERFAMILY Nucleotidyltransferase 22 201 IPR043519 -
Vimu9g00123 1342 MobiDBLite consensus disorder prediction 1200 1215 - -
Vimu9g00123 1342 Gene3D - 162 360 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g00123 Vimu-Chr9 1434708 1441267 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g00123 - - gmx:100809742 2332.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu9g00123 9 1434708 1441267 Vimu9g00123 9 1434708 1441267 ECH
Vimu2g01552 2 10809878 10815398 Vimu9g00123 9 1434708 1441267 PCT