Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g01552 ATGGGCGAGCATGAGGGTTGTGGACAGCCACCAAGTGGGATGTTGCCTAATGGCTTGCTGCCCAATGAGGCCGCATCGGTGATTCGAGTGCTTGACATGGAGCGATGGTTGAAGGCTGAGGAAAGGACTGCAGAGCTAATTGCCTGCATTCAGCCGAATCCGCCCTCCGAGGAGCGCCGCCACGCAGTTGCAGATTATGTGCAGCGGCTGATCATGAAGTGCTTCCCTTGCCAGGTGTTCACCTTTGGGTCAGTACCCCTCAAAACTTATTTACCTGATGGAGATATTGACCTGACAGCATTCAGCAAGAACCAAAATCTGAAGGATGCGTGGGCACACCAGGTTCATGACATGCTCCAGAATGAGGAAAAGGATGAAAATGCAGAGTTTCATGTCAAAGAGGTTCAGTACATCCAGGCGGAAGTGAAGATTATAAAGTGTCTTGTTGAGAATATTGTGGTGGACATTTCATTTAATCAACTTGGAGGATTGTGCACCCTTTGTTTTCTCGAGGAGGTTGATAATTTGATTAACCAAAACCATTTATTCAAGCGTAGCATTATACTTATAAAAGCCTGGTGTTACTATGAGAGTCGTATACTTGGTGCCCACCATGGACTTATCTCAACTTACGCATTAGAAACTTTGGTTCTTTACATATTTCATGTTTTCAACAATTCCTTTGCTGGTCCTCTTGAGGTGCTGTATAGGTTTTTGGAGTTCTTTAGTAAGTTTGATTGGGATAATTTCTGTGTAAGTCTATGGGGTCCTGTACCCATCAGTTCACTTCCAGATGTGACAGCTGAACCTCCTCGGAAAGATGGTGGAGATTTATTGCTCAGCAAGTTATTTCTTGATGCCTGCAGTTCAGTTTATGCTGTTTTCCCTGCTGGCCAAGAAAATCAGGGGCAACCATTTACTTCCAAGCATTTCAATGTTATTGATCCTTTGCGTGTCAACAATAACCTTGGGCGTAGTGTCAGCAAAGGAAATTTCTTTAGAATTCGCAGTGCTTTTGCATTTGGGGCCAAAAGGCTTGCTAGATTGCTTGATTGCCCTAAGGAGGATTTGTTTTTAGAAGTTAATCAATTCTTTATGAACACTTGGGTCAGACATGGAACTGGGCAGCGACCTGATGCTTTGAGCCATGACTTATGGCGTTTGACATCATCTAGTCATGACCAATCACACGGGTCTGACAATCTCCAGAAAAATAACAATAAAACTGAGAATACCTGTAATCATGAATTTCAAGTTAAAGGGGTGCATGCTTCACAGAGTGTTCTATCTCAACACAGTATATTGTCCTCTAAAAGTTTATCTAAGAGTAGTGGTGATTCTAAAGCTAACCAAAATAATGCAAGGAATTTTGATCAGGTCAAAAGGGAAGCTAACTGCAATCAAGGTGCTCGGGTTGATAAAGGACAGAGAAATGCTAAACCAAGTAACGCATTCAGTGATGTCCCAGGAAGACTTTTATTTGCAAGAACATGTTCTAGTCCTGAGTTGACAGACTCTTATGGTGAAATTCCTAGGCAAGGAAGACATGCAAAAGCCCCAGAAAGTGGGAAAGGACCAGCATCCTCTGCAACGTTGGAGAATAGTCACAGGAAGCATCTTGATTCTGACATGCCTGCTAGTTATGCTGTTAGAATTGATGATTCATCTGGTAGGAAAATAATATCACATCAGGTTCTTGACAGCAGTGCTGATTCAAACAATGGCTCAAATAGTTATGATAATGAATCTGGCCACGGCATTGTGGGTGAAGAGTTTGCTTCTTTTTCTGGAGTAGGTGGAACACATATGATGCATCAGGAGGAGCAGGACCTTTTGAACATGATGACATCACCCGCAACTGAAGGTTTCAGTGCTCAGAATCAAATACCAGTGAATTTAGCTCCAGGTCACATACCACTTCCACTTTCCCCTTCCATTCTTGCATCAATGGGATATGCTCATAGGAACATGGGTAACATTCCCTTAATTGAGTCCTTCAACTGGGGTACTAATGTGCAATTTCCCCAAGGTTTAGTCCCTTCCCCCTGGACTCCATATTTTCCTGGCATAGGATTGACCTCAAATCCTGAAGATTTAATCGAAACTGGTAATGAGAATTTCAATTCTGTTGAAATGAGTCCAGCAGAAGCTGATAAAGATTTCTGGCATGAGCAAGAAAGGGCTGGTGCTAGGGGGATTGACGTGGATAATGGTAATTTTGAAATGGTTCCAGATGATAAGCGACAGTCAACTTCTGGTGGTTATAACTTTATACCATCATCTCATGTTGGCAGCTCTAGTAATTCTGCCATACTTCATCCAACATTTACTAAAGAAAATCGAGTTTCTACAAGAGAAGAGCACATTGATAGTCCTAAATATCAAGATCGCCGAGGAAATGGTGCATATTTTGATGAAAGAATTGCAAATTCTTGGTTGCCCAGTGAACCATCCTCAAGCTCATTCAGGAGTAAGACGTCTTCAGAAAGCTCTTGGGAGGGACCATCTGCCAAATCTTCAAAATCAACTAGGGAAAAAAGAGGGAAGAAAAATACTTCCTCAGTGCCATCAGCTGCTTATGGTAAGGGCAAGAATGTCTCAGATATTTCCTCTAATGTTGTGGATGATGAAAACAAACAACGGGCACCTCTGTCAACTACAGCATCTGATAGAAGCACTGGGCTGCTCGCAGTTGCTCCTGTGCATGTTCCAAGGCAACCGGTGTCCGGTTCTGAAGTGGTTCGGACAAGTGGATCAGATTCTGTGTTACCCATGGCTCCAGTGCTTATAAGTCATGGTTCTCGCCAAAGAACAGGGGATAATTCTGGGGTTGTTCCATTGGCGTTCTATCCCACAGGGCCACCAGTACCATTTGTTACCATGCTTCCATTATATAATTTTCCCACTACTCAATCTTCTCACACACCAACAAGCAATTTCCATGTGGAAGATGCAGATAACAATGACCGTGGTCAGAGTTTTGATCCATCTGAAGTGCATGATCTGCCTGAGGTGTTGAGCTCTTCCAATTCTATGGGAAGAGCTGCTATTGACACAGTAGAGCCCAAGCTTGACATTCTTAATGGTGACTTTGTTAGCCATTGGAAAAATTTGCAGTATGGGCGAATTTGTCAAAATTCACGCCAACCTGATTCCGTTAACTATCCTTCATCTGTTGTGGTACCTCCTGTTTATTTGCAGAGTCGTTTTCCATGGGATGGTCCTGGAAGACCACAGTCAGCTAATGTGAATCTTTTCACTCAGCTTATGAACTATGGGCCACACCTAGTGCCTGTTGCTCCTCTCCATTCAGTTTCCAACAGACCAGCCAATATTTACCAACGATTCATAGATGACATACCACGGCATCGAAGTGGGACAGGAACCTACCTGCCAAATCCTAAGGTTTCTGTTCGGGATAGACATTCTACAAGCACCAGAAGGGGTAATAACAACTATGACAGAAGTGATCAGCATGGTGAGAGAGAAGGGAATTGGAATGTTAACTCAAAGTCGAGAACAAGTGGGCGCAGCCACTACCGTAGTCAAGCTGAGAGATCTAGCTCAAGGCCGGAAAAGTTGCCAACGGGTGAGAGCCATTCTGAAAGATCATGGGGTTCACATAGACCTGATTCTTTTGTTTCACACCAGAGTGGGCCTGTCCAGTTAAATACCTCTCAGAACAGTCTATCAAATTTGGCTTATGGAATGTACTCTCTACCGGGCTTGCGCCCCAGTGGGATATCATCAAATGGACCAACAATTCCACCTGTTGTAATGTGGTATTCATACGATCATAATGCTGGCTACGGCACACCAGCAGAACAGCTCGAATTTGGAACTCTAGGACCTATGGGTTTCCCTGGTGTCAATGAAGTATCACTGATCAATGAGGGAAGCCAATCTGGTGGAGCTTTTGAGGAACAAAGGTTTAATGGTGGCACTGCCCAACAATCGTCACCTGATCAACCTGCTTCACCCAAGTTCCGAAGGTTGTAA 3999 0.4371 MGEHEGCGQPPSGMLPNGLLPNEAASVIRVLDMERWLKAEERTAELIACIQPNPPSEERRHAVADYVQRLIMKCFPCQVFTFGSVPLKTYLPDGDIDLTAFSKNQNLKDAWAHQVHDMLQNEEKDENAEFHVKEVQYIQAEVKIIKCLVENIVVDISFNQLGGLCTLCFLEEVDNLINQNHLFKRSIILIKAWCYYESRILGAHHGLISTYALETLVLYIFHVFNNSFAGPLEVLYRFLEFFSKFDWDNFCVSLWGPVPISSLPDVTAEPPRKDGGDLLLSKLFLDACSSVYAVFPAGQENQGQPFTSKHFNVIDPLRVNNNLGRSVSKGNFFRIRSAFAFGAKRLARLLDCPKEDLFLEVNQFFMNTWVRHGTGQRPDALSHDLWRLTSSSHDQSHGSDNLQKNNNKTENTCNHEFQVKGVHASQSVLSQHSILSSKSLSKSSGDSKANQNNARNFDQVKREANCNQGARVDKGQRNAKPSNAFSDVPGRLLFARTCSSPELTDSYGEIPRQGRHAKAPESGKGPASSATLENSHRKHLDSDMPASYAVRIDDSSGRKIISHQVLDSSADSNNGSNSYDNESGHGIVGEEFASFSGVGGTHMMHQEEQDLLNMMTSPATEGFSAQNQIPVNLAPGHIPLPLSPSILASMGYAHRNMGNIPLIESFNWGTNVQFPQGLVPSPWTPYFPGIGLTSNPEDLIETGNENFNSVEMSPAEADKDFWHEQERAGARGIDVDNGNFEMVPDDKRQSTSGGYNFIPSSHVGSSSNSAILHPTFTKENRVSTREEHIDSPKYQDRRGNGAYFDERIANSWLPSEPSSSSFRSKTSSESSWEGPSAKSSKSTREKRGKKNTSSVPSAAYGKGKNVSDISSNVVDDENKQRAPLSTTASDRSTGLLAVAPVHVPRQPVSGSEVVRTSGSDSVLPMAPVLISHGSRQRTGDNSGVVPLAFYPTGPPVPFVTMLPLYNFPTTQSSHTPTSNFHVEDADNNDRGQSFDPSEVHDLPEVLSSSNSMGRAAIDTVEPKLDILNGDFVSHWKNLQYGRICQNSRQPDSVNYPSSVVVPPVYLQSRFPWDGPGRPQSANVNLFTQLMNYGPHLVPVAPLHSVSNRPANIYQRFIDDIPRHRSGTGTYLPNPKVSVRDRHSTSTRRGNNNYDRSDQHGEREGNWNVNSKSRTSGRSHYRSQAERSSSRPEKLPTGESHSERSWGSHRPDSFVSHQSGPVQLNTSQNSLSNLAYGMYSLPGLRPSGISSNGPTIPPVVMWYSYDHNAGYGTPAEQLEFGTLGPMGFPGVNEVSLINEGSQSGGAFEEQRFNGGTAQQSSPDQPASPKFRRL 1332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g01552 1332 MobiDBLite consensus disorder prediction 972 1007 - -
Vimu2g01552 1332 MobiDBLite consensus disorder prediction 734 800 - -
Vimu2g01552 1332 MobiDBLite consensus disorder prediction 1299 1325 - -
Vimu2g01552 1332 MobiDBLite consensus disorder prediction 779 800 - -
Vimu2g01552 1332 MobiDBLite consensus disorder prediction 390 409 - -
Vimu2g01552 1332 MobiDBLite consensus disorder prediction 983 997 - -
Vimu2g01552 1332 MobiDBLite consensus disorder prediction 852 891 - -
Vimu2g01552 1332 MobiDBLite consensus disorder prediction 814 838 - -
Vimu2g01552 1332 MobiDBLite consensus disorder prediction 1299 1332 - -
Vimu2g01552 1332 Gene3D - 162 358 - -
Vimu2g01552 1332 Gene3D Beta Polymerase, domain 2 52 161 IPR043519 -
Vimu2g01552 1332 MobiDBLite consensus disorder prediction 1122 1226 - -
Vimu2g01552 1332 MobiDBLite consensus disorder prediction 433 463 - -
Vimu2g01552 1332 FunFam PAP/OAS1 substrate-binding domain superfamily 162 358 - -
Vimu2g01552 1332 MobiDBLite consensus disorder prediction 1140 1166 - -
Vimu2g01552 1332 PANTHER PAP/OAS1 SUBSTRATE-BINDING DOMAIN SUPERFAMILY 16 1328 - -
Vimu2g01552 1332 MobiDBLite consensus disorder prediction 814 891 - -
Vimu2g01552 1332 SUPERFAMILY PAP/OAS1 substrate-binding domain 182 352 - -
Vimu2g01552 1332 MobiDBLite consensus disorder prediction 433 464 - -
Vimu2g01552 1332 MobiDBLite consensus disorder prediction 503 547 - -
Vimu2g01552 1332 FunFam PAP/OAS1 substrate-binding domain superfamily 52 161 - -
Vimu2g01552 1332 MobiDBLite consensus disorder prediction 744 778 - -
Vimu2g01552 1332 SUPERFAMILY Nucleotidyltransferase 21 201 IPR043519 -
Vimu2g01552 1332 CDD NT_PAP_TUTase 59 166 - -
Vimu2g01552 1332 MobiDBLite consensus disorder prediction 1210 1226 - -
Vimu2g01552 1332 MobiDBLite consensus disorder prediction 1178 1209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g01552 Vimu-Chr2 10809878 10815398 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g01552 - - gmx:100809742 1873.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu2g01552 2 10809878 10815398 Vimu9g00123 9 1434708 1441267 PCT