Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g00097 ATGGCAAAGAGTGGATCTTGGACTCGGATATGGCCATCTTTTGTCAGGCTATGTCTTCTGAATCTTGTCTTGAATTTCAAAACCACAGCATTGGCTGATGACACTGCAACTGTTGCTGCTACAACAGAAAACACCTGCAAGAACACAAATTATCAAACTTTCCTCCCTCCACCGTACCAGAATATCTCCCACATGATATGCACACCTGTATGGCATACCTTTGAATTGAGGTACATTATGAATGGTGATACCACAACTATGATACTATCTGCTCCCTACACTATAGGGTGGGTAGGAATTGGATTTTCCAGAGATGGCATGATGGTTGGTTCCAGTGCAATGGTTGGATGGATTAGTAAACATGGTCATGCAAAAATAAAGCAATTTTACCTACGAGGAAGAAGGCAATCAGAAGTGATAATAGACAAAGGGGAACTTCCTCTCAATAATGTCCCTCCAGCTGTGGCCACTAATGGGGCTGAAATTCATTTGGCATTTCAGTTGCAGACCACAACCCCATTTCAGAAACAGCCAATTTTGTTGGCCTTTGGCAGTAAATATCCACAGAACCACCACCTCTCAAACCATGAAGACAAAACAGCAATTGTGTTTGATTTCTCTGCAGGTTCTACGGGTCCTGTATCCCATGAATTGACTCAGATGAGAACGAAACATGGAATTTTGGGCATAATAGGGTGGGGTCTGATCCTGCCTGTAGGGGCAATTATTGCTAGATATTTCAGGCACAAGGATCCCTTATGGCTCTATCTCCATGCAATCATTCAGTTTGTGGGATTCACATTTGGGCTTAGTACCGTCATTCTTGGATTACAACTCTATTCCAAAATGCATGCCCATATACAAGCTCACAGAGGCATAGGCATTTTTGCCCTTGTACTGAGTATTCTTCAGATATTTGCATTGATCTTAAGACCAAAGAAGGATGCCAAGATCCGAAAAACTTGGAATTTGTACCACAGTTGGTTTGGAAGGTTGGCACTAATATTTGCGGCCATTAACATAGTTCTGGGAATGCAAGCTGCTGGGGCAGGAAGTGATTGGAAGATAGGATATGGGTTCCTTTTTGGTATTATGGTTACTGCAGCGATTGTTCTTGAAGTATTGGCTTATTTGAAAAGATCAGAGATGCGTTCTCTACCTCCTAACTTCCAAATAGACCCTGTTGGAGGACCTACATTTCCAAGTAATCAAGCCCTTTCTTTCCTTTTTCTTCCATCGTTTTATATAATCTGTTTAGTGAAAATGGCCCTGAAAAAACAGAACTTTTAA 1290 0.4163 MAKSGSWTRIWPSFVRLCLLNLVLNFKTTALADDTATVAATTENTCKNTNYQTFLPPPYQNISHMICTPVWHTFELRYIMNGDTTTMILSAPYTIGWVGIGFSRDGMMVGSSAMVGWISKHGHAKIKQFYLRGRRQSEVIIDKGELPLNNVPPAVATNGAEIHLAFQLQTTTPFQKQPILLAFGSKYPQNHHLSNHEDKTAIVFDFSAGSTGPVSHELTQMRTKHGILGIIGWGLILPVGAIIARYFRHKDPLWLYLHAIIQFVGFTFGLSTVILGLQLYSKMHAHIQAHRGIGIFALVLSILQIFALILRPKKDAKIRKTWNLYHSWFGRLALIFAAINIVLGMQAAGAGSDWKIGYGFLFGIMVTAAIVLEVLAYLKRSEMRSLPPNFQIDPVGGPTFPSNQALSFLFLPSFYIICLVKMALKKQNF 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g00097 429 SMART DOMON_3 97 184 IPR005018 -
Vimu9g00097 429 CDD DOMON_DOH 73 201 IPR045266 -
Vimu9g00097 429 ProSiteProfiles DOMON domain profile. 72 184 IPR005018 -
Vimu9g00097 429 PANTHER CYTOCHROME B561 AND DOMON DOMAIN-CONTAINING PROTEIN 37 377 - -
Vimu9g00097 429 Pfam DOMON domain 76 143 - -
Vimu9g00097 429 Gene3D - 200 384 - -
Vimu9g00097 429 SMART 561_7 224 345 IPR006593 -
Vimu9g00097 429 ProSiteProfiles Cytochrome b561 domain profile. 187 381 IPR006593 -
Vimu9g00097 429 CDD Cyt_b561_FRRS1_like 204 374 - -
Vimu9g00097 429 Pfam Eukaryotic cytochrome b561 225 346 IPR006593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g00097 Vimu-Chr9 1152675 1154914 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g00097 - - gmx:100807608 702.205
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu9g00097 9 1152675 1154914 Vimu9g00097 9 1152675 1154914 ECH
Vimu2g01546 2 10762137 10769268 Vimu9g00097 9 1152675 1154914 PCT