Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g01546 ATGGCAAAGCTAAGATCTTGGACTCAGATATGGCGTTCTATTGTCGGAATGTGTATTCTGAATTTTGTTTTGAACTTCAAGATCGTAACGTCAGCTGATGACACTGGAAGTAACAGTATTGTATCAGAAGGTGACTGCAAGAACACGAATTATCAGATTTTCCTCCCTCCACCATATCAGAATATATCCTCTACCATTTGCAAACCTGTTTGGCATTCATACGAATTAAGGTACACCAAGACAGGTGACACAACAACTATCATATTATCTGCACCCTACACAGTTGGATGGGTGGGAATTGGATTTTCAAGAGATGGCATGATGGCTGGTTCCAGTGCGATGGTAGGATGGGTTAACAAACATGGTCATGCAAAAGTCAAGCAATTTTATCTAAGGGGTAGAAGGCAATCAGAAGTAATTGTAGACAAAGGTGAACTGCCTCTGAATAATGTACCAGCTGCAGTGGCAACAAATGGAGCTGAAATTTACGTAGCGTTTCAGCTACAAGCGACAACTCCATTTGGGAAGCAACCGATTTTATTGGCTTTCAGTACTAAACGTCCACTGAACCATCATCTATCAAAACATGAAGACAAAACAGCGGTTATATTCGATTTTTCTTCAGGTTCTACGGGCCCGGTATCCAATTGGTTGATTCAGATAAGAAAAAGCCATGGAATAGTGGGTGTGTTAGGGTGGGGCCTAATCCTGCCTGTGGGGGCAATTATTGCTAGGTACTTCAGGCACAAGGATCCCCTATGGTTTTATCTCCATTCAGTCATTCAATTCGTGGGATTTGCGTTTGGTCTTGCCACAGTCCTTCTTGGATTACAACTCTATAGAAGTGTGCATGTTCACATACCAGCTCACAGAGGCATAGGCATATTTGTTCTTGTCTTAAGTATTCTTCAGATATTGGCATTTTTCTTGAGGCCAGACAAGGATTCCAAGTTTAGAAACATTTGGAATTTGTATCACAGTTGGTTTGGAAGAATGGCTCTTTTCTTTGCAGCCTTGAATATAGTGTTGGGGATGCGAGCTGCGGGTGCAGGGAATGGTTGGAAGATAAGCTATGGATTCCTTGTGAGCATTATACTTGTGGCAGTTATCGTTCTCGAAGTAATGGCGTATTTAAAAAGGTCACAAAAGCGTTCTCTTCCTCACACTTTCCAAATGGACCCAGTTGGAGAAGCAAACTTTCCAACCAATCTTGCTAAAGGTACGTGCCCTTTTCCCTTGTTTCATACTACTTCATCTGTTTACTGA 1266 0.4186 MAKLRSWTQIWRSIVGMCILNFVLNFKIVTSADDTGSNSIVSEGDCKNTNYQIFLPPPYQNISSTICKPVWHSYELRYTKTGDTTTIILSAPYTVGWVGIGFSRDGMMAGSSAMVGWVNKHGHAKVKQFYLRGRRQSEVIVDKGELPLNNVPAAVATNGAEIYVAFQLQATTPFGKQPILLAFSTKRPLNHHLSKHEDKTAVIFDFSSGSTGPVSNWLIQIRKSHGIVGVLGWGLILPVGAIIARYFRHKDPLWFYLHSVIQFVGFAFGLATVLLGLQLYRSVHVHIPAHRGIGIFVLVLSILQILAFFLRPDKDSKFRNIWNLYHSWFGRMALFFAALNIVLGMRAAGAGNGWKISYGFLVSIILVAVIVLEVMAYLKRSQKRSLPHTFQMDPVGEANFPTNLAKGTCPFPLFHTTSSVY 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g01546 421 Gene3D - 200 386 - -
Vimu2g01546 421 ProSiteProfiles Cytochrome b561 domain profile. 187 381 IPR006593 -
Vimu2g01546 421 SUPERFAMILY CBD9-like 75 218 - -
Vimu2g01546 421 ProSiteProfiles DOMON domain profile. 72 186 IPR005018 -
Vimu2g01546 421 SMART 561_7 224 345 IPR006593 -
Vimu2g01546 421 CDD DOMON_DOH 74 139 IPR045266 -
Vimu2g01546 421 Pfam DOMON domain 76 166 - -
Vimu2g01546 421 CDD Cyt_b561_FRRS1_like 204 374 - -
Vimu2g01546 421 PANTHER CYTOCHROME B561 AND DOMON DOMAIN-CONTAINING PROTEIN 35 382 - -
Vimu2g01546 421 SMART DOMON_3 97 184 IPR005018 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g01546 Vimu-Chr2 10762137 10769268 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g01546 - - gmx:100792152 761.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu2g01546 2 10762137 10769268 Vimu9g00097 9 1152675 1154914 PCT