Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g00034 ATGAGAATGTTTCAGAAAGCCTTGGCTTCAACTCAAGTCTTTCTTTTCTTCTTCGTTGTGGTGTTCTCTACTCCACCAGAGGATCCGATCAAGTGTTCTTCAGGGAACACAAGCTGCACCATCACAAACTCCTATGGGATGTTTCCCGATCGAAGCATCTGCCATGCCTCTCAGGTGCTGTACCCCACCACCGAGCAAGAGCTTGTGTCAATGGTTGCTTCAGCAGTCAGAAGCAAAACGAAGATGAAAGTTGCGACCCGGTTTTCGCACAGCATCACGAAGCTGGTGTGCCCAGAAGGCCAAAATGGGGTGCTGATAAGCACAAGATACCTGAACAAGATAGTGAAGGTTGACGTGGAAGCAAGAACAATAACAGTGGAGAGTGGTGTGACACTGAAAGATCTTATCAGTGAGGCTGCAAAGGCAGGGTTGGCTTTGCCATATGCACCATATTGGTGGGGTTTGACCATTGGAGGGCTCATGGGAAGTGGTGCACATGGAAGCACTTTGTGGGGGAAGGGAAGTTCTGTTCATGATTATGTCGTCAACCTTATGATTGTCAGGCCTGCTGCTCCTCAAGAAGGTTATGCTAAGGTTGAGATCCTCAATCAACAACATGAAGATCTCAATGCAGCAAAACTCTCACTCGGTGTGCTTGGAGTTATTTCACAGATTACTCTAAAACTAGAAGGTATCTTCAAGCGATCCATCACGTATGTGGCAAAAAATGATTCAGATTTGGGAGAACAAGTTGCTTCTTTTGGATATGCACATGAGTTTGGTGATATAACGTGGTACCCAAGTCAACGTAAGGCTGTGTATCGTGTTGATAATCGTGTGCCAATTAATGCATCGGGCAATGGTCTTTACGACTTTATCCCCTTCCGGCCCACTCCTTCTCTTGCATTGGCACTCCTAAGAACCACAGCAGAAGATGTTCAAGAATCTGCTGGTGATGCCGATGGGAAGTGCATAAGTGCTAAGACCACAACGACTACCCTCATCACCTCAGCATATGGACTTACCAATAATGGTATAATCTTCACTCGATACCCTGTAATTGGATTTCAGAACCGGCTTCAGGCATCTGGGACATGCTTGGATAGTCTTAAAGATGCAAAGATCACAGCATGTGCCTGGGATTCCAGGGTGAAGGGAGAGTTTTTTCACCAAACCACATTCAGCATTGGTTTGTCAGTTGTGAAAGATTTCATTGAAGATGTGCAAAAGCTGGTTGAATTGGAGCCAAAGGGGTTGTGTGGCTTAGATCTTTACAATGGAATTCTCATGCGTTATGTGAAGGCTTCAAATGCCTACTTGGGGAAGCAAGAGGATGCTTTAGACTTTGATATCACCTACTACCGTAGCAAGGACCCTATGAGTCCTAGGCTCTATGAAGACATTGTTGAAGAGATTGAGCAAATTGGGATTTTCAAATATGGAGGGTTACCTCATTGGGGTAAGAATAGGAACTTGGCGTTTGAAGGAGCCATCAAGAAGTACAAAAATGCAGAGAAATTTTTGAGGGTTAAAGAGAAGTATGATTCAGAAGGGCTTTTCTCAAGTACGTGGACAGATCAAATGCTTGGACTAAAAGATGGGGTGACGATAGTGAAGGATGGATGTGCTTTAGAAGGGTTATGCATTTGCTCACAGGATAGTCATTGCAATCCAAGCAGAGGTTACTATTGCAGAGCAGGCAAAGTTTACAAGGAAGCAAGGGTTTGTACTCATTTGAAATCCAAATGA 1749 0.4454 MRMFQKALASTQVFLFFFVVVFSTPPEDPIKCSSGNTSCTITNSYGMFPDRSICHASQVLYPTTEQELVSMVASAVRSKTKMKVATRFSHSITKLVCPEGQNGVLISTRYLNKIVKVDVEARTITVESGVTLKDLISEAAKAGLALPYAPYWWGLTIGGLMGSGAHGSTLWGKGSSVHDYVVNLMIVRPAAPQEGYAKVEILNQQHEDLNAAKLSLGVLGVISQITLKLEGIFKRSITYVAKNDSDLGEQVASFGYAHEFGDITWYPSQRKAVYRVDNRVPINASGNGLYDFIPFRPTPSLALALLRTTAEDVQESAGDADGKCISAKTTTTTLITSAYGLTNNGIIFTRYPVIGFQNRLQASGTCLDSLKDAKITACAWDSRVKGEFFHQTTFSIGLSVVKDFIEDVQKLVELEPKGLCGLDLYNGILMRYVKASNAYLGKQEDALDFDITYYRSKDPMSPRLYEDIVEEIEQIGIFKYGGLPHWGKNRNLAFEGAIKKYKNAEKFLRVKEKYDSEGLFSSTWTDQMLGLKDGVTIVKDGCALEGLCICSQDSHCNPSRGYYCRAGKVYKEARVCTHLKSK 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g00034 582 Gene3D - 391 491 - -
Vimu9g00034 582 FunFam L-gulonolactone oxidase 2 391 491 - -
Vimu9g00034 582 Pfam FAD binding domain 57 188 IPR006094 GO:0050660
Vimu9g00034 582 PANTHER GULONOLACTONE OXIDASE 23 571 - -
Vimu9g00034 582 SUPERFAMILY FAD-binding/transporter-associated domain-like 50 229 IPR036318 GO:0050660
Vimu9g00034 582 Pfam D-arabinono-1,4-lactone oxidase 390 527 IPR007173 GO:0003885|GO:0016020
Vimu9g00034 582 NCBIfam FAD-dependent oxidoreductase 25 577 IPR010030 -
Vimu9g00034 582 Gene3D - 113 230 IPR016169 -
Vimu9g00034 582 ProSiteProfiles PCMH-type FAD-binding domain profile. 52 232 IPR016166 GO:0071949
Vimu9g00034 582 FunFam L-gulonolactone oxidase 5 113 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g00034 Vimu-Chr9 399772 405110 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g00034 K00103 - gmx:100790483 1014.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu9g00034 9 399772 405110 Vimu9g00034 9 399772 405110 ECH
Vimu10g00091 10 521773 525010 Vimu9g00034 9 399772 405110 PCT