Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g00091 ATGAAGGAACAAGCTTTAAGGTTTGTGTTCTTATTGATCTGTGTCTGTGGAGTAATTGCAACTCCTCCACAAGATCCCATCCGCTGTGCTTCAAAAAACACAAACTGCACCATCACCAACACCTATGGCATCTTCCCCGACCGGACCACTTGCCGCGCCGCCGAGGTTGTCTACCCCACCTCGGAGGAGGAGCTGGTATCCGCGGTGGCATCAGCTTCCAAGAACAAAAGAAAAGTGAAAGCCGCAACGCGCTTTTCCCACAGCATAACCAAGCTGGCTTGTCCCGACGGCGAAAACGGGTTGCTGATAAGCACTAAGAATCTGAACAAGATACTGAACATCGACGAGAAGGGAAGGACAATGACGGTGCAGAGTGGCGTGTCGTTGAGACAGATCATCACGGCGGCCGGAGAGAATGGTTTGGCCTTGCCTTATGCGCCGTACTGGTGGGGTTTAACCATTGGTGGAATGATGGGTACAGGTGCTCATGGAAGCACGTTGTGGGGCAAAGGAAGCGCCGTTCATGAGTATGTGGTAGAGTTGAGAATCGTTACTCCTGCTGGACATGAAGATGGCTATGCTAAGATTCGAACACTTAACCAATCTCATCCCTCTCTCGATGCAGCCAGAGTTTCCCTCGGAGTTCTTGGAGTTCTTTCTCAGGTTACCCTAAAATTGGAGCCTCTCTTCAAGCGATCCATTACATATATCACCAAAGATGATACAGATTTAGGAGATGAACTTGTTACTTTTGGAAGAAAACATGAGTTTGGTGATGTAATATGGTACCCAAGTCAGAAAAAGGCTGTCTATAGAATCGATGACCGTGTATCTGTTAATGCATCTGGAAATGGCTCATACAATTTCTTCCCATTTCGTTCCACAGCCTCAGCAGCATTAGCTGTTGTTAGATCTACAGTTGTTTCTTCATATCTTCATTTAACAGAGGAACTTCAAGAAGCAACACGTGATGCTAATGGAAAGTGTGTTGGTGCGAAGTTGATAACTGCGCTACTGTCAGGCATTGCTTATGGGTTGACTAACAATGGTATCTTTCTTGGATATCCTGTTGTTGGATTTAGCAACAGGATGCAAGCATCAGGAACATGTTTAGATAGTTTGAACGATGGATTGATTACGGCATGTCCATGGGATTCAAGAATAAAAGGGGAGTTCTTTCACCAAACTGCGTTTAGCATTTCCCTGTCTGTAGTAAAAAACTTTGTGGAAGATGTGCAAAAACTCGTTGAGTTGGAGCCAAGGTCACTCTGTGGGTTAGAAATAGCGAATGGAATCCTTATGCGCTATGTTACAGCTTCCAGCGCTTACCTTGGAAAATCAGAAGATGCTGTGGATTTTGACATCACTTACTATCGCAGTAAAGATCCATTGGCTCCTAGGCTTTTCCAAGATATACTTGAAGAAATAGAACAGATTGGATTGTTCAAATACGGAGGATTACCCCACTGGGGCAAAAATAGAAACTTAGCATTTATTGGAATAATCAAAAAGTATGATAATGCAGAGAAATTTTTGAAGGTTAAAAAGGAGTATGACCCAGATGAAATCTTCTCGAGCGAGTGGACAGATCAAATGCTTGGACTTAAAGAAGGGGTGACAGTATTTAAGGATGGATGTGCAATGGAAGGAATGTGCATTTGCTCAGAAGATAGACACTGTTCACCAAAGAGTGATTACTTATGCAAACCAGGGAAAATTTATAAAGAAGCGAGGGTTTGCACTCATGTTTCTAAGAAAACCAAAGAAACAGATGATTTTAAGGACGAATTATGA 1794 0.4348 MKEQALRFVFLLICVCGVIATPPQDPIRCASKNTNCTITNTYGIFPDRTTCRAAEVVYPTSEEELVSAVASASKNKRKVKAATRFSHSITKLACPDGENGLLISTKNLNKILNIDEKGRTMTVQSGVSLRQIITAAGENGLALPYAPYWWGLTIGGMMGTGAHGSTLWGKGSAVHEYVVELRIVTPAGHEDGYAKIRTLNQSHPSLDAARVSLGVLGVLSQVTLKLEPLFKRSITYITKDDTDLGDELVTFGRKHEFGDVIWYPSQKKAVYRIDDRVSVNASGNGSYNFFPFRSTASAALAVVRSTVVSSYLHLTEELQEATRDANGKCVGAKLITALLSGIAYGLTNNGIFLGYPVVGFSNRMQASGTCLDSLNDGLITACPWDSRIKGEFFHQTAFSISLSVVKNFVEDVQKLVELEPRSLCGLEIANGILMRYVTASSAYLGKSEDAVDFDITYYRSKDPLAPRLFQDILEEIEQIGLFKYGGLPHWGKNRNLAFIGIIKKYDNAEKFLKVKKEYDPDEIFSSEWTDQMLGLKEGVTVFKDGCAMEGMCICSEDRHCSPKSDYLCKPGKIYKEARVCTHVSKKTKETDDFKDEL 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g00091 597 SUPERFAMILY FAD-binding/transporter-associated domain-like 46 228 IPR036318 GO:0050660
Vimu10g00091 597 PANTHER GULONOLACTONE OXIDASE 11 575 - -
Vimu10g00091 597 Gene3D - 394 495 - -
Vimu10g00091 597 Gene3D - 110 228 IPR016169 -
Vimu10g00091 597 NCBIfam FAD-dependent oxidoreductase 22 581 IPR010030 -
Vimu10g00091 597 Gene3D - 45 109 IPR016167 -
Vimu10g00091 597 ProSiteProfiles PCMH-type FAD-binding domain profile. 49 229 IPR016166 GO:0071949
Vimu10g00091 597 FunFam L-gulonolactone oxidase 5 110 228 - -
Vimu10g00091 597 Pfam D-arabinono-1,4-lactone oxidase 395 531 IPR007173 GO:0003885|GO:0016020
Vimu10g00091 597 Pfam FAD binding domain 55 189 IPR006094 GO:0050660
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g00091 Vimu-Chr10 521773 525010 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g00091 K00103 - gmx:100801515 971.844
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g00091 10 521773 525010 Vimu9g00034 9 399772 405110 PCT