Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g00028 ATGGGAAACTGCGTGTTCAAAGGCTTTCACCATAACATCTCCGAAGACATGATGGTGAAGGTGGTAACCTCAAACGGAGGCATCATGGAACTCTTCTCTCCCATCACTGTGGAATGCATAACCAACGAGTTTCCCGGCCACGGCATCTTCCGGAGCCGCCGCGACATCTTCTCCGAACCGCTTCCGAAAGCGGAAGAGCTCCACGGCGGCCAAGTCTACTACCTCCTCCCTCTCAACCCTTCTTCTTCCCGAAAGAGCATGACACGACAATTATCCGATGTGGCCTTAACTCCTTACCGAATGTCCACGTGTGACAAAAGCAACACTAACAACAACAACGTCTACACGGAACCAGAAGTGGTCCCCAGATACAATAGTAGTGGGGTGTGGAAGGTGAAGTTGGTGATCAGCCCTGAGAAGCTGTCAGAGATCCTGTCGCAAGAGTCGCGGACCGAGGCGTTGATAGAGAGCGTGAGGACGGTGGCGAAGTGCGGCAACGGTGTTCCGTCGTCGGTGGCGAACTCCGATCAGTGGAGTTTGGCTAGCAGTTGGAAAGGCTCTATGTCGGAGAAGATGGGTGTAGAACAATAA 591 0.5296 MGNCVFKGFHHNISEDMMVKVVTSNGGIMELFSPITVECITNEFPGHGIFRSRRDIFSEPLPKAEELHGGQVYYLLPLNPSSSRKSMTRQLSDVALTPYRMSTCDKSNTNNNNVYTEPEVVPRYNSSGVWKVKLVISPEKLSEILSQESRTEALIESVRTVAKCGNGVPSSVANSDQWSLASSWKGSMSEKMGVEQ 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g00028 196 PANTHER PLASTID MOVEMENT IMPAIRED PROTEIN-RELATED 1 188 - -
Vimu9g00028 196 Pfam PADRE domain 1 166 IPR025322 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g00028 Vimu-Chr9 271020 271610 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g00028 - - gmx:102665356 349.747
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu9g00028 9 271020 271610 Vimu9g00028 9 271020 271610 ECH
Vimu10g00085 10 480228 480791 Vimu9g00028 9 271020 271610 PCT