Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g00085 ATGGGGAACTGTGCGTTCAGAGGAATCATCAAAAGTGAAGGTGCTTGGGAAAAGGATAAGATGGTCAAGGTCATCACCCCAAACGGAGCCATCATGGAGCTCTACACCCCCATAACCGCCGACTGCATAACCAACGAGTTTTCCGGCCACGGAATATTCCGAAGCCGCCGCGACTTGTTCTCGGAGCCGCTCCACCGTGAAGATGAGCTTCTTGCGGGGGAGCTCTACTACCTTCTCCCTCTCGACCCTTCTTGCAGGTTGTCATCCACCAAGAACATCGCCAGACAACTATCCAACAACGCTGCTGCCAGTGCGACCTTAACGCCGTACAGAATGTGTACCTATGATAACAACAATAGTAGGATGTGGTCGGAAACCGGTGAAGTGTTTCCGAGGAAAGGAGTGTGGAAGGTGAAATTGGCAATAAGCCCGGAACAGCTTGCGGAGATATTGTCGCAGGAGTCACAGACGGAGGCGTTCGTGGAGAGCTTGAGGACGGTGGCAAAGTGTGGCAATGGCGTGCTGTCGGCGCCGAATTCTGATCACTCAACTACCTGTGACTGA 564 0.5301 MGNCAFRGIIKSEGAWEKDKMVKVITPNGAIMELYTPITADCITNEFSGHGIFRSRRDLFSEPLHREDELLAGELYYLLPLDPSCRLSSTKNIARQLSNNAAASATLTPYRMCTYDNNNSRMWSETGEVFPRKGVWKVKLAISPEQLAEILSQESQTEAFVESLRTVAKCGNGVLSAPNSDHSTTCD 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g00085 187 PANTHER PLASTID MOVEMENT IMPAIRED PROTEIN-RELATED 1 177 - -
Vimu10g00085 187 Pfam PADRE domain 1 153 IPR025322 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g00085 Vimu-Chr10 480228 480791 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g00085 - - gmx:100777742 288.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g00085 10 480228 480791 Vimu9g00028 9 271020 271610 PCT