Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g00016 ATGGCTTCAACCTCTTCTGCTCTCACTGTATCCTCTTCTTCCACACTTTTTGATGGCAAGGCTCCAAGACACTCACCACCTCTTTCTCCACAATGTGTCAGCCTTCCCCTCCCCAATTTCCACTCTCAAAACCGTTCATGGAAGACCACTGCTTATAATGGCAAGATTGCTAGAAATGTTATGGCAATGGCCACTGGAGAGGCACCGGCCGAAGCTTCCTCAACTGAGGTGCCAGAGATTGTCAAGACTCTTCAAGAAACTTGGGACAAAGTTGATGATAAGTATGCAGTGAGTTCTCTGGCCCTGGTTGGTGTGATTGCATTGTGGGGCTCAATTGGATTGATCTCGGCAATTGATAGGCTTCCCTTGATTCCTGGGATTCTTGAGATTGTAGGCATTGGCTACACTGGGGTGAGTGATGTATACTTAGATTGCTGGTTTGGTTATACTGTTAATGCTTATGAGAATGAACTTATGGAAGAAACAAGAACACTGATAAATTTATCAAAAACCAGAGGGGCTTTTAACAATTGCAAGTACATACTGATGGGATTTTTTAGGGAGTTTATTAGATGTGTTATTCATCTTCTCTGTTTTTCTTTGCAGTGGTTCGCATATAAGAACATAGTTTTCAAGCCAGACAGGGAAAATTTGATACAGAAAGTAAAAGAAACATACAATGAAATACTCGGGAGCAACTGA 702 0.4202 MASTSSALTVSSSSTLFDGKAPRHSPPLSPQCVSLPLPNFHSQNRSWKTTAYNGKIARNVMAMATGEAPAEASSTEVPEIVKTLQETWDKVDDKYAVSSLALVGVIALWGSIGLISAIDRLPLIPGILEIVGIGYTGVSDVYLDCWFGYTVNAYENELMEETRTLINLSKTRGAFNNCKYILMGFFREFIRCVIHLLCFSLQWFAYKNIVFKPDRENLIQKVKETYNEILGSN 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g00016 233 Pfam CAAD domains of cyanobacterial aminoacyl-tRNA synthetase 82 137 IPR025564 -
Vimu9g00016 233 PANTHER - 24 232 IPR033344 GO:0009579
Vimu9g00016 233 Coils Coil 151 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g00016 Vimu-Chr9 166038 168016 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g00016 - - gmx:100306403 234.958
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu9g00016 9 166038 168016 Vimu9g00016 9 166038 168016 ECH
Vimu10g00075 10 445917 447058 Vimu9g00016 9 166038 168016 PCT