Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g00075 ATGGCCTCAACCTCCTCCTCCACCCTCTCTTTATCCTCTTCCTCCACCCTTGTTGACGCCAAGGCTCCAAGGCAATCACCATCTTCTTCCCCACAATGTGTCACCCTTCCCACTCTTCCTCCACCACCTGTCCACTCTCAGACTCGTCCTTCCAAAACTGCTGCTTTCTGTCGCAGGATTGCTCGAAATGTTATGGGAATGGCTACCACAAGAGAGGCACCGGCAGCAGAAATTGCCACAACTGAGCTTGCTATTGCTGAGACGCCAGAGATTGTGAAGACTATTCAAGAAGCTTGGGAGAAAGTTGAAGATAAATATGCAGTGAGTTCGCTGGCCGTAGCTGGTGTGGTTGCATTGTGGGGCTCAGCAGGAATGATCTCAGCAATTGATAGGCTTCCTTTAATTCCTGGGGTTCTTGAGGTTGTAGGCATTGGCTACACTGGGTGGTTTGCTTACAAGAACCTAGTTTTCAAGCCAGACAGGGAAGCTTTTGTAAGAAAGGTAAAAGAAACATATAATGAAATACTTGGGAGCAGCTAA 540 0.4815 MASTSSSTLSLSSSSTLVDAKAPRQSPSSSPQCVTLPTLPPPPVHSQTRPSKTAAFCRRIARNVMGMATTREAPAAEIATTELAIAETPEIVKTIQEAWEKVEDKYAVSSLAVAGVVALWGSAGMISAIDRLPLIPGVLEVVGIGYTGWFAYKNLVFKPDREAFVRKVKETYNEILGSS 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g00075 179 PANTHER - 10 178 IPR033344 GO:0009579
Vimu10g00075 179 MobiDBLite consensus disorder prediction 1 52 - -
Vimu10g00075 179 MobiDBLite consensus disorder prediction 1 33 - -
Vimu10g00075 179 Pfam CAAD domains of cyanobacterial aminoacyl-tRNA synthetase 93 177 IPR025564 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g00075 Vimu-Chr10 445917 447058 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g00075 - - aprc:113849332 230.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g00075 10 445917 447058 Vimu9g00016 9 166038 168016 PCT