Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g00009 TTGTCACTTATTGTTAATGTTATGAACATGGCTTTGCTGTTTTTAGTCTTGAAGATGAGTACTGAGGAGAAAAGTGAAGAAGGTGGTGAAACTCGTTCAGCTCCTAAATTAAATGAAAGGATTCTGTCATCTTTGTCTAGGAGATCAGTTGCTGCTCATCCTTGGCATGATCTTGAAATTGGACCTGGGGCACCTATGATTTTTAATTGTGTTGTGGAGATCACTAAAGGAAGCAAGGTCAAATACGAACTTGACAAAAAAACTGGATTAATCAAGGTTGATCGAATATTGTACTCATCAGTTGTTTATCCTCATAACTACGGTTTCATCCCAAGAACTCTATGTGAAGACAATGATCCACTTGATGTTTTGGTTCTCATGCAGGAGCCAGTTCTTCCTGGTTGTTTCCTAAGAGCCAGGGCCATTGGACTCATGCCTATGATTGATCAGGGAGAGAAGGATGATAAAATTATTGCTGTATGTGCTGATGATCCTGAGTATAAACACTACACTGACTTGAAAGAACTTGCACCTCATCGCCTCTCTGAGATTAGACGTTTCTTTGAAGATTACAAGAAGAATGAGAACAAGGAGGTAGCAGTTAATGACTTTTTACCTGCATCTACTGCTGTTGAAGCCATCCAATTCTCAATGTCAGTATCTTTAGAGCACCTGGGATCTTTACGCGGAGTATATTCTGCTTACTTTGAGGCGATAAACAAAAATACTATTCTCTACAAGCTATAA 747 0.3909 MSLIVNVMNMALLFLVLKMSTEEKSEEGGETRSAPKLNERILSSLSRRSVAAHPWHDLEIGPGAPMIFNCVVEITKGSKVKYELDKKTGLIKVDRILYSSVVYPHNYGFIPRTLCEDNDPLDVLVLMQEPVLPGCFLRARAIGLMPMIDQGEKDDKIIAVCADDPEYKHYTDLKELAPHRLSEIRRFFEDYKKNENKEVAVNDFLPASTAVEAIQFSMSVSLEHLGSLRGVYSAYFEAINKNTILYKL 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g00009 248 Pfam Inorganic pyrophosphatase 70 218 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Vimu9g00009 248 Hamap Inorganic pyrophosphatase [ppa]. 66 222 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Vimu9g00009 248 PANTHER INORGANIC PYROPHOSPHATASE 22 220 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Vimu9g00009 248 ProSitePatterns Inorganic pyrophosphatase signature. 117 123 - -
Vimu9g00009 248 CDD pyrophosphatase 66 215 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Vimu9g00009 248 Gene3D Inorganic pyrophosphatase 49 225 IPR036649 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Vimu9g00009 248 SUPERFAMILY Inorganic pyrophosphatase 47 222 IPR036649 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Vimu9g00009 248 FunFam Soluble inorganic pyrophosphatase 4 49 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g00009 Vimu-Chr9 90003 92319 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g00009 K01507 - gmx:100500365 377.096
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g00065 10 396564 398160 Vimu9g00009 9 90003 92319 PCT