Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g00065 ATGGCTGAGAATGGCGAAGAAGCTCAAGAAAATCGTCCAGTTCCACGTTTGAATGAAAGGATTCTTTCTTCTTTGTCAAGGAGATCAGTAGCTGCCCATCCTTGGCATGATCTTGAAATTGGACCGGAGGCTCCTCAGATTTTCAACTGTGTTGTGGAGATCACTAAAGGAAGCAAGGTGAAGTATGAACTTGACAAAAAGACTGGATTGATTAAGGTTGATCGGATTCTGTATTCATCTGTTGTTTATCCTCATAACTACGGTTTCATCCCTCGCACACTGTGTGAAGACAATGACCCAATGGATGTCTTGGTCCTCATGCAGGAACCAGTACTTCCTGGCTGTTTCCTGCGAGCCAGGGCCATTGGAATCATGCCCATGATTGACCAGGGAGAGAAAGATGATAAAATTATTGCAGTGTGTGCTGATGACCCAGAATATAAGCACTTTACCGACTATAAAGAACTTGCACCTCACCGCATCTCTGAGATCCGACGCTTCTTTGAAGACTACAAAAAGAATGAGCACAAGGAAGTAGCAGTTAATGACTTTCTACCTGCAAGCGTTGCTGTTGATGCCATCCAGGATCTCTATGCAGAGTATATTCTGCACACCTTGAGGCGATAG 627 0.4434 MAENGEEAQENRPVPRLNERILSSLSRRSVAAHPWHDLEIGPEAPQIFNCVVEITKGSKVKYELDKKTGLIKVDRILYSSVVYPHNYGFIPRTLCEDNDPMDVLVLMQEPVLPGCFLRARAIGIMPMIDQGEKDDKIIAVCADDPEYKHFTDYKELAPHRISEIRRFFEDYKKNEHKEVAVNDFLPASVAVDAIQDLYAEYILHTLRR 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g00065 208 PANTHER INORGANIC PYROPHOSPHATASE 7 207 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Vimu10g00065 208 Hamap Inorganic pyrophosphatase [ppa]. 46 202 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Vimu10g00065 208 Pfam Inorganic pyrophosphatase 50 201 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Vimu10g00065 208 SUPERFAMILY Inorganic pyrophosphatase 27 202 IPR036649 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Vimu10g00065 208 CDD pyrophosphatase 46 196 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Vimu10g00065 208 Gene3D Inorganic pyrophosphatase 29 204 IPR036649 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Vimu10g00065 208 FunFam Soluble inorganic pyrophosphatase 4 29 204 - -
Vimu10g00065 208 ProSitePatterns Inorganic pyrophosphatase signature. 97 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g00065 Vimu-Chr10 396564 398160 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g00065 K01507 - gmx:100811094 409.068
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g00065 10 396564 398160 Vimu9g00009 9 90003 92319 PCT