Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g02718 ATGGCCATAAAGGCAATTGAGTTGTTGAAAGGAGGTGAAAACCATGAAGAGATAATGGAGGTTCTTGCAGCAGTGGCTGCAGATTTGGGAGATGTAATAGATGATCTGAACTCTTTGCAGGTAAAACCTCTAAAAGGAGCAATGACCAATGAGGTTTTTGAGGTAAATTGGCCAACCAAAAGTGATGGTCATCAGAGAAAGGTTCTGGTTCGATTATATGGTGAAGGTATTGAGGTTTTCTTCAACAGGGTTGATGAAATCCAAACCTTTGAATCCATGTCAAAGCATGGACAGGGTCCACGCCTTCTTGGACGGTTCACCACTGGCAGAGTTGAAGAGTTCATTCATGCCAAAACACTCTCAGCTGCGGACCTCCGTGACCCTGAAATATCTGCTTTGGTAGCATCTAAGATGAGAGAGTTTCACAATCTTCACATGCCTGGTACAAAGAAGGCACAGCTTTGGCAGCGATTGAGGAAATGGCATAGTCATGCCAAAAGTCTGTGCTCTCCAAAAGATATTAAGAATTTTGGCCTGGAACATCTAGATACTGAAATAAATATGCTTGTGGAGTTGCTATCGCAAGGATATAAAGAGATTGGTTTTTGTCACAATGATCTACAATATGGTAACATAATGATGGATGAAGATACAAGGGCAATCACTTTAATTGACTACGAATATGCCAGTTACAACCCTGTTGCATACGATCTAGCAAATCATTTTTGTGAAATGGTGGCAAACTATCACAGTGACCAACCTCATGTTCTTGACTACACTAAATATCCCGGTCTTGAAGAGCGTCAAAGGTTTGTTTATAATTATTTGAGTTCTGAAGGTAAGGAACCAAGCAGCAGTGAAGTGGAACAGCTACTTAATCTTGCAGAAAAATACACTCTTGCCAACCATCTATTTTGGGGCTTATGGGGACTTATTTCGAGTTATGTCAACACAATTGACTTTGACTACAAGGAGTATGCAAGGCAGAGGTTTCAGCAGTACTGGTTGAAGAAGGCTACTTTATTGGACTCTCCAAGCGTCATTTCCGAACATGGAAGGGTCAAAGGTTCACACCATTGA 1080 0.413 MAIKAIELLKGGENHEEIMEVLAAVAADLGDVIDDLNSLQVKPLKGAMTNEVFEVNWPTKSDGHQRKVLVRLYGEGIEVFFNRVDEIQTFESMSKHGQGPRLLGRFTTGRVEEFIHAKTLSAADLRDPEISALVASKMREFHNLHMPGTKKAQLWQRLRKWHSHAKSLCSPKDIKNFGLEHLDTEINMLVELLSQGYKEIGFCHNDLQYGNIMMDEDTRAITLIDYEYASYNPVAYDLANHFCEMVANYHSDQPHVLDYTKYPGLEERQRFVYNYLSSEGKEPSSSEVEQLLNLAEKYTLANHLFWGLWGLISSYVNTIDFDYKEYARQRFQQYWLKKATLLDSPSVISEHGRVKGSHH 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g02718 359 CDD ETNK_euk 39 335 - -
Vimu8g02718 359 Gene3D - 74 335 - -
Vimu8g02718 359 Pfam Choline/ethanolamine kinase 65 266 - -
Vimu8g02718 359 Gene3D Phosphorylase Kinase; domain 1 37 114 - -
Vimu8g02718 359 PANTHER CHOLINE/ETHANOALAMINE KINASE 16 343 - -
Vimu8g02718 359 SUPERFAMILY Protein kinase-like (PK-like) 35 341 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g02718 Vimu-Chr8 38423116 38427636 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu8g02718 17 351 Acyl Lipid Metabolism Gene Families AT1G74320 63.284 1.08e-163 459
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g02718 K14156 - gmx:547972 656.751
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu8g02718 8 38423116 38427636 Vimu8g02718 8 38423116 38427636 ECH
Vimu8g02718 8 38423116 38427636 Vimu3g02882 3 42949751 42953465 PCT