Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g02882 TTGGGTTCTCAAAACCGGCATCTTTCTTCGTGTGTTTGTGCATGCAGGAAAACTCTTAACCAAAATCTGTTTCGGCTTCCTCTGCTTTTGGGCACGAACAGAGTTGTTCTGTTTTCGAGGATGGCCATCAAGACAATTGAACTGTTGAAAGGGTGCGGATCGCAGGAAGAGATAATGGAAGTGCTTGCTGCGGTTGCGTCAGATATGGGTGATGCGATCGATGATGTGAGCACCTTGCAGGTGATCCCATTGAAGGGTGCAATGACCAATGAGGTTTTCCAGGTAAAATGGCCTTCTAAAAATGGTGGTGAAGTCAGAAAGGTTCTGGTTCGTTTATATGGGGAAGGTGTTGAAGTTTTCTTCGACAGGGAAGAAGAAGTGAAAACCTTTGAGTGCATGTCAGAGCATGGTCAAGGACCTCGCCTTCTTGGCCGTTTCACTTCTGGTAGAGTTGAGGAGTTTATTCATGCCAGAACTCTCTCAGCTGCTGACCTGCGTGACCCTGAAGTATCTGCTTTGGTGGCATCTAAGATGAGAGAGTTCCATAATCTTCACATGCCTGGTGCAAAGAAGGCTCAAATTTGGCACAGATTGAGGAATTGGCTTGGTCAAGCCAAGAGTCTGTGCTCTCCAAAGGATGCCAAAAATTTTGGCTTGGACAATCTGGATGAGGAAATAAACATCCTGGAGAAGAAGTTATCTGAAGGATATCAAGAGATTGGCTTCTGTCACAATGATCTACAGTATGGTAACATAATGATGGAGGAAGAGTCAAAATTAATCACTATAATTGACTATGAATATGCAAGTTATAATCCTATTGCTTATGACATAGCAAATCATTTCTGTGAAATGGTGGCTGATTACCACAGTGACACACCTCATGTTCTTGACTTCAAGAAATATCCAGGACTAGAGGAACGTCAAAGATTTATCCGCATCTATCTGAGTTCTGAAGGCAATAAACCAAGCAATGCTAAAGTGAACCAGTTAGTGAAAGCAACTGAAAACTACACTGCAGCAAACCATATATTTTGGGGTTTGTGGGGACTCATTTCGAGTTATGTGAATAAAATAGACTTTGACTATAAGGAGTATGCAAGGCAGAGGTTTCAGCAATACTGGTTAAGGAAGGCTAATTTATTGGACTCGACAAGCATCGTTTCCCAAGACCAAACTATGAATGAATCTCTACCATCTTTCACGTGA 1209 0.4243 MGSQNRHLSSCVCACRKTLNQNLFRLPLLLGTNRVVLFSRMAIKTIELLKGCGSQEEIMEVLAAVASDMGDAIDDVSTLQVIPLKGAMTNEVFQVKWPSKNGGEVRKVLVRLYGEGVEVFFDREEEVKTFECMSEHGQGPRLLGRFTSGRVEEFIHARTLSAADLRDPEVSALVASKMREFHNLHMPGAKKAQIWHRLRNWLGQAKSLCSPKDAKNFGLDNLDEEINILEKKLSEGYQEIGFCHNDLQYGNIMMEEESKLITIIDYEYASYNPIAYDIANHFCEMVADYHSDTPHVLDFKKYPGLEERQRFIRIYLSSEGNKPSNAKVNQLVKATENYTAANHIFWGLWGLISSYVNKIDFDYKEYARQRFQQYWLRKANLLDSTSIVSQDQTMNESLPSFT 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g02882 402 Gene3D - 114 375 - -
Vimu3g02882 402 PANTHER CHOLINE/ETHANOALAMINE KINASE 55 385 - -
Vimu3g02882 402 SUPERFAMILY Protein kinase-like (PK-like) 75 381 IPR011009 -
Vimu3g02882 402 Pfam Choline/ethanolamine kinase 106 306 - -
Vimu3g02882 402 CDD ETNK_euk 79 377 - -
Vimu3g02882 402 Coils Coil 219 239 - -
Vimu3g02882 402 Gene3D Phosphorylase Kinase; domain 1 77 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g02882 Vimu-Chr3 42949751 42953465 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu3g02882 57 385 Acyl Lipid Metabolism Gene Families AT1G74320 65.046 2.19e-170 478
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g02882 K14156 - gmx:547866 672.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu8g02718 8 38423116 38427636 Vimu3g02882 3 42949751 42953465 PCT