Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g02697 ATGGCTCCAGCTCGCAAGGCTGAGGAAAAGGCGGCGGCGGATGCAGCTGCATGGATGTTCAATGTTGTTACATCTGTTGGAATTATCATTGTAAACAAAGCTTTGATGGCCACTCATGGATTCAGTTTTGCTACAACATTAACAGGCATGCACTTCGCCACCACAACTTTAATGACAATCATACTAAAGATGCTGGGAGTTGTCCAGCCTTCTCATTTACCCTTGCCAGAACTCTTAAAATTTGTTGTCTTTGCCAACTTCTCTATTGTTGGAATGAATATTAGTTTAATGTGGAACTCAGTTGGATTTTATCAAATTGCAAAGTTAAGTATGATCCCTGTATCATGCCTGTTGGAAGTTGTTCTCGACAAGATTCGGTATTCAAGAGACACGAAATTGAGCATAGGTGTTGTTCTTTTGGGTGTTGGTGTTTGCACTGTTACTGACGTGAGTGTTAACGCTAGAGGATTCATCGCTGCTTTCATTGCAGTGTGGAGCACTTCCATGCAACAATATTATGTTCATTATCTTCAAAGGAAGTATTCTCTAAGTTCTTTCAACCTATTGGCACATACAGCACCTGCACAGGCTGCATCACTACTGTTATTAGGACCTTTTCTAGATTTTTGGTTGACAAACGCAAGAGTTGACAAATATGACTATAAGACTGCCTCGTCGATATTCATATTCCTGTCATGCACCATTGCAGTTGGCACCAACCTAAGCCAATTTATCTGCATCGGCAGATTCACTGCTGTTTCCTTTCAAGTACTGGGACATATGAAGACAATACTTGTTTTAATCATGGGGTTCTTTTTCTTTGGTAAAGAGAATCTCAATCTCCAAGTGGTTTTTGGAATGATTATAGCTATAGTTGGAATGATTTGGTATGGCAATGCCTCATCCAAACCTGGTGGAAAGGAGCGCTGGGGCCATTCTCTTCCTACCAACAAAACAGAAACATGA 966 0.4089 MAPARKAEEKAAADAAAWMFNVVTSVGIIIVNKALMATHGFSFATTLTGMHFATTTLMTIILKMLGVVQPSHLPLPELLKFVVFANFSIVGMNISLMWNSVGFYQIAKLSMIPVSCLLEVVLDKIRYSRDTKLSIGVVLLGVGVCTVTDVSVNARGFIAAFIAVWSTSMQQYYVHYLQRKYSLSSFNLLAHTAPAQAASLLLLGPFLDFWLTNARVDKYDYKTASSIFIFLSCTIAVGTNLSQFICIGRFTAVSFQVLGHMKTILVLIMGFFFFGKENLNLQVVFGMIIAIVGMIWYGNASSKPGGKERWGHSLPTNKTET 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g02697 321 Pfam Triose-phosphate Transporter family 23 297 IPR004853 -
Vimu8g02697 321 PANTHER SOLUTE CARRIER FAMILY 35 18 301 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g02697 Vimu-Chr8 37808449 37810651 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu8g02697 18 320 Organic Solute Cotransporters AT1G21870 26.791 7.58e-13 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g02697 K26224 - gmx:100786437 556.984
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu8g02697 8 37808449 37810651 Vimu8g02697 8 37808449 37810651 ECH
Vimu8g02697 8 37808449 37810651 Vimu3g02887 3 43016821 43019104 PCT