Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g02887 ATGGCAACGACTAGCAGGGCTGAGAAGAAGGCAGCAGTGGATGCAGCTGCGTGGGTGTTCAATGTTGTCACTTCTGTTGGAGTTATCATTGTAAACAAAGCTTTGATGGCCACTTACGGCTTCAGTTTTGCTACAACATTAACAGGTCTTCATTTCCTTACTACAACTTTGATGACATCCATACTAAAGATGCTGGGATACGTCCAGCCTTCGCATTTACCCTTTCCAGAACTCCTAAAATTTGTTTTATTTGCTAACTTCTCCGTTGTTGGAATGAATATTAGTCTAATGTGGAACTCAGTTGGATTCTATCAAATTGCTAAGTTGAGTATGATACCTGTATCGTGCCTTTTTGAAGTTGTTTTCGACAAGGTTAGGTACTCTAGAGGCACGAAACTCAGCATATGTGTCGTTCTCTTAGGTGTTGGTGTTTGCACGGTTACTGATGTGAGTGTTAACACAAGAGGTTTTGTTGCTGCCTTTGTAGCAGTGTGGAGTACTTCTATGCAACAATATTATGTCCATTTCCTCCAGAGGAAGTATTCACTCAGTTCTTTCAACCTATTGGGACATACAGCACCGGCACAGGCTGGATCACTACTTCTTCTGGGCCCTTTTCTAGACTACTTGTTGACAAACAACAGAGTTGACCAATTTGCTTATAATTCAGGTTCTTTGATGTTCATATTTATGTCATGCACTATAGCAGTGGGGACCAACCTTAGTCAATTTATCTGCATTGGCAGATTCACTGCGGTCTCTTTTCAAGTACTAGGCCACATGAAGACCATACTTGTTCTGATAATGGGGTTCTTTTTCTTTGGGAGGGAAGGTCTTAATATTCAAGTGGTTTTAGGGATGGTTATAGCTGTGTGTGGAATGATATGGTATGGCAATGCCTCATCAAAGCCTGGTGGAAAGGAGCGTTTGAATCACTCTCTTCCCACCAACAAAACAGAAAACCAATAG 969 0.4159 MATTSRAEKKAAVDAAAWVFNVVTSVGVIIVNKALMATYGFSFATTLTGLHFLTTTLMTSILKMLGYVQPSHLPFPELLKFVLFANFSVVGMNISLMWNSVGFYQIAKLSMIPVSCLFEVVFDKVRYSRGTKLSICVVLLGVGVCTVTDVSVNTRGFVAAFVAVWSTSMQQYYVHFLQRKYSLSSFNLLGHTAPAQAGSLLLLGPFLDYLLTNNRVDQFAYNSGSLMFIFMSCTIAVGTNLSQFICIGRFTAVSFQVLGHMKTILVLIMGFFFFGREGLNIQVVLGMVIAVCGMIWYGNASSKPGGKERLNHSLPTNKTENQ 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g02887 322 Pfam Triose-phosphate Transporter family 23 297 IPR004853 -
Vimu3g02887 322 PANTHER SOLUTE CARRIER FAMILY 35 17 301 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g02887 Vimu-Chr3 43016821 43019104 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu3g02887 18 320 Organic Solute Cotransporters AT1G21870 26.498 9.09e-14 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g02887 K26224 - gmx:100776319 551.977
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu8g02697 8 37808449 37810651 Vimu3g02887 3 43016821 43019104 PCT