Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g02634 ATGTGCCATGCTTATGAAGAGTTAAAAGGACAAACGGGTACAAGTCTTTATGACCTTGAGATTCTGGGATGGTTAGTAATGGGATTGAATATTTGTTCAAACTCCAAAGAATCATTAGAAGGTTTGATTGCAAACGAAAGGAACGATCTTGGTCAGATGGGACGCGGCGAGTTGGTGACAGTTGACAACGTATCTGGAGATGAGCTTGAATCAACTTCTTCTGAGAAGGAGGAGAATTGGAGTGAAAATATGGAGCAGAATTCTTCAGAGGTTAATTCTACATCTTCAGAGTTCAATTCTACACTTGGAGTAGAGCCTGTTGGAACTGAGAGTAAACTTGTTGCTGCTGACAATGAGATTTTGTTTCCTAAATCAATGATGGAATTTTGGGATTCTCCAAGGCAAGACCTAATAGTGGACAGGCTTTCAGAGTGTGAGAAGCAAAAGCTGCTTAACCTTGTAAAGATACAAAATGATGGGACTGTTGACGTTGATCTGGAAAAAGATGCACCTCTTGTATCCGAATTGTTGAAGTTTCAATCTTTTGAAGAGTCAACAATGAGTGCAAGTGTTGTTTCTGAATCAAAAAAATCAGCTCCATGGTTACAAATTGTCATGCTTGTGGACTATGGTCATCGTGTTAGGCTGGCAACACATGCTGATTTTGACACATTTGTAAAGAGTGCTGGTGTTGATTTCTATCCGTTGGGTGGTGACCCTCGTGCTTTGGCAAGATATATGGTGAGGAATAAAGGTATAATCCCATCTGGTCCAACTGAAATATCTATCCAAAGAAAGCAGCTGAAGGCTATTATTGATTCTCTTCTTCCAGCATGCATAGAACCTGATTTGGAAACTGGTATTCCTTTTAGAGCTCAGGCTATTATAGCCAATCCTACAGCATGTGGACATACACATATTGCTGAAGCCCTCGGGGTGCCCCTTCACATCTTCTTCACAATGCCTTGGACGCCAACATATGAGTTTTCACACCCTTTGGCGCGTGTACCTCAAAGTGCTGGTTATTGGCTGTCATATATAATTGTGGATGTACTGATATGGTGGGGAATACGAGGACTCATCAATGACTTCAGGAAAAGAAAATTGAAGCTTGCTCCTATTGCATACTTCAGTATATACAGTGGATCAATTACTCATTTACCTACTGGCTATATGTGGAGTCCTCATGTGGTTCCAAAACCAACTGACTGGGGCCCCTTAGTTGATGTCGTTGGTTATTGTTTCTTGAACCTTGGCTCAAAGTATCAACCACAGGACGATTTTGTCCGATGGATTCAAAAAGGACCAAAACCTTTATATTTTGGGTTTGGGAGCATGCCTCTTGATGATCCTAAAAGAACTACTGATGTCATAGTGGAGGCACTGAAGGATACAGGACAACGAGGAATTATTGATCGGGGCTGGGGGAATCTAGGCAATTTGGCAGAAGTTCCAGAAAATGTTTTCGTGCTAGAGGAATGCCCTCATGACTGGTTGTTTCCCCAATGTTCAGCTTTGGTGCATCATGGTGGTGCTGGAACAACGGCTACAGGACTAAAGGCCGGGTGTCCAACAACCATTGTTCCATTCTTTGGAGATCAGTTCTTTTGGGGAGACAGGATATATCAGAGAGGGCTGGGACCTGTTCCAATTCCTATATCTCAGCTTAGTCTTGAAAATTTAACAAATGCCATAAAATTCATGCTCCAGCCAGAGGTAAAATCACAAGCAATGGCAATCGCAAAGTTGATAGAGAATGAAGACGGTGTTACAGCTGCAGTTGATGCGTTTCACCGCCATCTACCACCAGAGCTACCACTACCAACTCCATCTCCTGTAGTGGAGGACCATGCAAATCCATTGCAGTGGTTTTTTGTCCAACTAGCAAAGTTGTGCACTTTACCTTGTGGGAGTGTATAG 1920 0.425 MCHAYEELKGQTGTSLYDLEILGWLVMGLNICSNSKESLEGLIANERNDLGQMGRGELVTVDNVSGDELESTSSEKEENWSENMEQNSSEVNSTSSEFNSTLGVEPVGTESKLVAADNEILFPKSMMEFWDSPRQDLIVDRLSECEKQKLLNLVKIQNDGTVDVDLEKDAPLVSELLKFQSFEESTMSASVVSESKKSAPWLQIVMLVDYGHRVRLATHADFDTFVKSAGVDFYPLGGDPRALARYMVRNKGIIPSGPTEISIQRKQLKAIIDSLLPACIEPDLETGIPFRAQAIIANPTACGHTHIAEALGVPLHIFFTMPWTPTYEFSHPLARVPQSAGYWLSYIIVDVLIWWGIRGLINDFRKRKLKLAPIAYFSIYSGSITHLPTGYMWSPHVVPKPTDWGPLVDVVGYCFLNLGSKYQPQDDFVRWIQKGPKPLYFGFGSMPLDDPKRTTDVIVEALKDTGQRGIIDRGWGNLGNLAEVPENVFVLEECPHDWLFPQCSALVHHGGAGTTATGLKAGCPTTIVPFFGDQFFWGDRIYQRGLGPVPIPISQLSLENLTNAIKFMLQPEVKSQAMAIAKLIENEDGVTAAVDAFHRHLPPELPLPTPSPVVEDHANPLQWFFVQLAKLCTLPCGSV 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g02634 639 Pfam Glycosyltransferase family 28 N-terminal domain 207 328 IPR004276 GO:0005975|GO:0016758|GO:0030259
Vimu8g02634 639 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 206 601 - -
Vimu8g02634 639 PANTHER STEROL 3-BETA-GLUCOSYLTRANSFERASE 207 630 - -
Vimu8g02634 639 MobiDBLite consensus disorder prediction 69 83 - -
Vimu8g02634 639 Gene3D Glycogen Phosphorylase B; 415 584 - -
Vimu8g02634 639 CDD GT1_Gtf-like 207 600 IPR002213 GO:0008194
Vimu8g02634 639 FunFam Sterol 3-beta-glucosyltransferase UGT80A2 415 584 - -
Vimu8g02634 639 Gene3D Glycogen Phosphorylase B; 207 589 - -
Vimu8g02634 639 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 440 583 IPR002213 GO:0008194
Vimu8g02634 639 MobiDBLite consensus disorder prediction 84 103 - -
Vimu8g02634 639 MobiDBLite consensus disorder prediction 62 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g02634 Vimu-Chr8 36649502 36664366 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu8g02634 202 639 Glycosyltransferase AT1G43620 77.149 0.0 737
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g02634 K05841 - gmx:100797391 1072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu8g02634 8 36649502 36664366 Vimu8g02634 8 36649502 36664366 ECH
Vimu8g02634 8 36649502 36664366 Vimu3g02918 3 43301784 43309343 PCT