Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g02918 CAGGAGTATGGTCATCATGTTAGGCTGGCAACTCATGCTAATTTCAAAACATTTGTAAAGTCAGCTGGAGTAGATTTCTATCCTCTGGGTGGTGATCCTCGTGTTTTGGCAGGATATATGGCTAGGAATAAAGGTTTAATCCCTTCTGGACCGGCTGAAATATCTGTCCAAAAAAAACAGCTGAAGGCAATCATTGATTCCATTCCTCCAGCATGCACAGCACCTGATATGGAAACTGGTGTTTCTTTCAGAGCTCAGTCTATTATTGCCAACCCTCCTGCTTATGGACATGTACACGTTGCTGAAGCCCTTGGGGTGCCCCTCCATATCTTCTTCACAATGCCATGGACGCCAACATATCAGTTCCCCCACCCTTTGGTACGTGTTCCTCAAAGTGCTGGTTATTGGCTGTCCTATATAATTGTAGATCTGCTGATATGGTGGGGAATGCGAAGAATTATCAATAACTTCCGGAAATCGACATTGAAGCTTGCTCCTATTGCATACTTCAGTATGTACCGTGGATCAATATCTCATTTACCGACTAGCTATATGTGGAGTCCTTATGTTGTTCCAAAACCAAATGACTGGGGCCCTTTAGTTGACGTTGTTGGTTATTGTTTCTTGAGCCTTGCATCAAAGTATCAACCTCGGGAAGATTTTGTCCAATGGATTAAAAAAGGGCCACCTCCTTTGTATTTTGGGTTTGGGAGCATGCCTCTTGAAGATCCCAAAGGAACAACAGATGTTATATTGGAGGCACTAAGAGATACGGAACAGCGGGGAATTATTGACCGGGGTTGGGGCAATCTAGGGAATTTGATAGAACTTTCTGACAACGTTTTCCTTCTGGAGGAATGCCCTCACGATTGGCTGTTTCCTCAATGTTCTGCTGTGGTGCATCATGGCGGAGCGGGAACCACCGCTACAGGATTAAAAGCTGGGTGTCCAACAACCATAGTTCCATTCTTTGGAGATCAATTCTTTTGGGGAGAGAGAATATATCAGAAAGAATTGGGACCCGCTCCAATCCCAATATCTGAGCTCAACGTTGAGAATTTATCAAATGCCATTAGATTCATGCTCCAGCCAGAGGTGAAGTCTCGGGCAATGGAAATTGCTAGGTTGATTGAGAATGAAGATGGTGTTGCTGCTGCGGTTGATGCATTCCATCGACATCTGCCCGATGAGTTACCACTGCCAACTCCATCTGTGGTGGAGGATGAAAACTTGAATCCTTTACAGTGGTTTTTTCTCCGACTTGGAAGGTTTTGTTGTGCTCCTTGTGGTGGTGTGTAG 1299 0.4473 QEYGHHVRLATHANFKTFVKSAGVDFYPLGGDPRVLAGYMARNKGLIPSGPAEISVQKKQLKAIIDSIPPACTAPDMETGVSFRAQSIIANPPAYGHVHVAEALGVPLHIFFTMPWTPTYQFPHPLVRVPQSAGYWLSYIIVDLLIWWGMRRIINNFRKSTLKLAPIAYFSMYRGSISHLPTSYMWSPYVVPKPNDWGPLVDVVGYCFLSLASKYQPREDFVQWIKKGPPPLYFGFGSMPLEDPKGTTDVILEALRDTEQRGIIDRGWGNLGNLIELSDNVFLLEECPHDWLFPQCSAVVHHGGAGTTATGLKAGCPTTIVPFFGDQFFWGERIYQKELGPAPIPISELNVENLSNAIRFMLQPEVKSRAMEIARLIENEDGVAAAVDAFHRHLPDELPLPTPSVVEDENLNPLQWFFLRLGRFCCAPCGGV 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g02918 432 CDD GT1_Gtf-like 1 393 IPR002213 GO:0008194
Vimu3g02918 432 FunFam Sterol 3-beta-glucosyltransferase UGT80A2 208 377 - -
Vimu3g02918 432 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 233 376 IPR002213 GO:0008194
Vimu3g02918 432 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 2 394 - -
Vimu3g02918 432 PANTHER STEROL 3-BETA-GLUCOSYLTRANSFERASE 1 397 - -
Vimu3g02918 432 Gene3D Glycogen Phosphorylase B; 208 377 - -
Vimu3g02918 432 Gene3D Glycogen Phosphorylase B; 1 382 - -
Vimu3g02918 432 Pfam Glycosyltransferase family 28 N-terminal domain 1 120 IPR004276 GO:0005975|GO:0016758|GO:0030259
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g02918 Vimu-Chr3 43301784 43309343 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu3g02918 1 432 Glycosyltransferase AT1G43620 77.064 0.0 722
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g02918 K05841 - gmx:100800091 849.351
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu8g02634 8 36649502 36664366 Vimu3g02918 3 43301784 43309343 PCT