Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g02625 ATGGACCTGGAATTGGGACTCAAAATCACCAAAACTAGAGATGACATTGCTTCCATCTCTGAATATCGATTAGCAAAAGCAGGACCTGTTTTTCAATCTAGAGAGACAAGCACTGCTTTCATTCTCACTGCTCATCTCAAAGGTTTTAAGAAGAATAACATTAACATCAAGATTAGTGAAGATGGTAGCAAGATATCAGTTAGTGGAGAGAAGCCTGTTCAGAATATTTTGATGATGGGATGGTTAATGCATAGGAAAGAGGTTGATGTTGCAGGGTTTAATAAGGTTTTCAAAATTCCTGATGGGGTGAAATTGGATGGGATCAAAGCCAAGTATGATGAGGAGGAATGGATAATGAACATTATCATGCCAAAATTGGTTAAAGGAATTTGTGGGGTTAAGATTGAAGAGGTCAAGGAAGATGAATCTGATGGAAGGAGATCAGAACAAGAGAAAAATGAAGGTGATCACATTCCTAGTGCTGTAGGAGAAACAAGCCAAAAGGGGTCTAAAGAGTCTGAAGTTCAGGAAATGGAGGAGAGTGAATGTTCTATGGAGAAGAAGGAAGAAGTGTCTAACAAGATGCTTGATGATTCCAACAGGAAAATAACTAAGGATACTGTACATAAAGAAGTAGAAGAATCTAAAGTTGGAACTGATGGTGAAAATGAAGATAGTTTTAGAGAAGTTGGAAAGGAAGAATATGAAGTGAAGAAGACATCAGAACCAGAGCAAAAAGTTGGAGTAGGCACCTCAGAGAAAATTGGAGAAGCAAGCCAAAAGGAAATCAAAGAATTAAAGTTGAAGAATGAGGATGGAAGAGTAAAACCATCAGCAAAGGGGAAAAGTGTAGGTGAAGGTGTTCCTAAAGACATTGGAGGAGATACAAGACAAGATAAAGAGTTGAAGGTTCAAGAAATGGAGGGCAATGAAGGTTTTGTAGAGAAGGAGGAGAAAGGAGCAAGTGAAAATATGCTTGATGATGCCAATGCAAACATAATTGGAGAGGTGATCCAGAAAGAAGAAGAATCCAAGTCAGAAATTAAGGATAGAGATGGAGAAAGTGTGAAAGAAAATAATGTGAGAACAGGACACAAAGGAATGAAGATATCAGAAATTGAGCAGAATGTTGGTGCAGATGTCACACAGAATATTGGAGATAAAATCCAAAGAGTATCTAAAGATTCTGTTATAGAACAAATAGGGGGAAATAAAAGTATTGAAGAGAATATGGAGAGAGAAGAGCCAGAAGAGATGGTTGTTGAAGCCAATGTGTCTACTGAGGGAGAGACACTTGGAGACTCAAAACAAAAACAATTTGGAGAACCGAGTTCTGAAACCGAGGATAGACTAAATGAATGTGTGAAGGAAAATAGAATGGAAACAATTAAGGCACTACAACTTGACCAAAATGTAGATGATCAGATTCCTACTAACATTGGTGGTATAAGCCAAGAAGGATATAAGGAGTCCAGGATTCAATGGAAGAAGAAAACTAAAAGCATAAAAGAGAATTTGGAAGAAGGGAAGGAAGAATTTGATTTAATGGAAACAAAGGGAGAATTTCCTCAGAAGTTACCAAAAGGCACAACTGAGGAAAGCAAAAGGTTGAGTGTTTCAAAAATGCAAGAAACTGAATATGTCAAAGAAGCAAAGATCAAAACAAAATGGAAACAGAATGAATATTTGGTGGATAAGGATGAAGGTGAAGAACTCACAAGGATGCACAAGCAAGCCAAAAAAGACTTGGCAAAAAACGAACTGCAAGAAAATGTCAAAGAAGCAATGGGCAAAAGAGAAAGGAAAGAGATTGAATATTTTGTGGATAAAAGTGCAGGTGAAGAGCACAAAAGGAGGCATATGGAGGCAAAAAAAGACTTAACAAAAGAGACAATGAAAAACAATGAAGCAAGAATGGACAAAAGAGAAGATAAAGAGATTGAGTACTTTGTGGAAGCATCGAAGGACTTAAATACAAAGAAAATTCAAGAAATTGAAGATATCGAAGAAGAAATGTCCAAAAGAAAAGACAAAGGGATTGAAAAATTTGAAGATAAGGGTGAAAGGAAAGAACACAACAGGTTGTATATGGATGCGAAGGACTTCAAAAAAGGGAGAATACAAGAAAATGAAGATATCCATGAAGCAATGATAAAAAGAGAAGGCAAAAATAACGAACATTTTGGGGATAAGCGTGGTGAAAACCCCGAAAGGATGCATATGGAATCAAAGAAGAACATAGCAAAGGAGAGAATGCAAGAAACATATGATGTCAAAGAAGCAACCGTTAAAAGAAAAGGAGAAGAGATTGGAAATTTTACAGATAAGGGTGAAGGTGAAGAACCTACAAAGATGATTACGCATGCAAAGAAAGAGTTAACAAAAGAAACAGAGCAAGAAAATGAAAAAGTAAACGAAGCTGTGCTCAAAACGAAAGACAAAGAAATTGAACGTTTTGTTGATAAGGGTGAACCCAAAAGCATGAATGTGGAACCAAAGAAGGGCTTAACAGCAAAGACCATGCAAGAAAGTGAAAATATCAGAGAAGCAATGGTCAAAGGAGAAGGCAACGGTTATATATATTTTGTGAATAAAGGTGTAAGTGAAGAACCCGAAAGGATGCATATAGAACCAAAGAAGGACATGGCAAAAGAGAAATTGCAAGAAGAAGTTTCCAAAGAAGCAATGGTGAAAATAAAAGGTAAAGAGATTGAAAATTATGTTGTTAAGGATGGAGGTGAAGAAAACAAGAAGATGAATATGAAACTAAAGAAAGAGTCAACAAAAGAAACAAAGCAAGGAAGTGAAAATGTCAAAGAAGCCATGGGGAAAATGAAAGGCAAAGAGACTAAATATTCTGTAGACAAGGGTGAAGGTGAAGAACCCAAAAGCTTGAATGTGGAAGCAAAGAAGGAAGATGATAGAGAATGCAAAGATTGTGAATGTTTTGTGGATAGGGGTGAAGCTGAAGAGACCAAAAGGATGCTAATAGAACCAAAGAACGTAGCAAGAGAGACAATACAAGAAATAAAAGGTGTCAAGGAAGCAATGGTCAAAAGAAAAGGCAAAGAGATTGAAAGTTTGGCTGATAAGGATAAAGCTGGGGAACTCACAAAGATGCTTGCGAAGTCAAACAAAGAGTTAACAAAAGAAAAAAAGCAACAAAGTGAAAAAATCAAAGAAGCTATGGTCAAAAGGAAAGGCAAAGAGACTGAATATTTTGCTGATAAGGGTGAAGATAAAGAGCCCAAAGGCATGTATGTGGAAGAAAAGAAGGACTTAACAACAACAAAGACTACACAAGAAAGTGAAGAACCCAAAAGGATGCATATCAAACCAAAGGACATAACAAAAGATACAATACCAAAAACAGCTATCAAAGAGACCAAGGTCAAAACAAAAGACAAAGAGATTGGAAATTTTGTTCACAAGTATGATGGTGAAGAACACATAAAGATGCTCATGAAAGAGTTACCAAAAGAAAGAGACAAAGAAAGAAAAAAAGTCAAAGAAGTAATGGTCCAAAAGAAAGTCAAAGAAACTGAATATTCTATAGATAAGGGTGAAGATGAAGAACCCATAAACATGCATGTGGAAGCTGAGAAGGACTTAACATCAAAGACTATACGAGAAAGTGAAGATGTGAGGGATGAAGTGGTCGAAACAGGAGGCAAAGATTATGAATATTTTGTTGATGATGGTGAGAGTGAAGAACTTAAAATGATAAATACGGAAGCAAAGAAGAACACGGGAAGAGAGTCAATGCAAGAAACAAAAGGTGCAAAAGAAGCAATGGCTAAAAGAAAAGGCAAAGAGATTGGAAGTTTTGAAAAGGGTGAAGATAAAGAGACTAAAAAGGTGCATGTGGAAGACAAGAAGGACTTGACAACAGTGACAGTGGAGGAAAATGATGGTGCCGATGAAGGCAATGAAAACAAATGCTTTTCGGATGAGGGCGAAGATGAAGAACCCAAAAGGATGTATATGGAAACAAAAAAGGATTTTAGAGAAGAGACATTGCATGAAAGTGAAAATGTAAAAAATGTGAAGGTAAAAAGCGAAGGCAAAGACGTTGAAAGTTTTGCAGATAAGAGTGCAGACAAAGAATCGATAAGGATGCTTATGGGAACAAAGAGAGACTTGACAAAAGAGGAAGTGCATGGAAAAGACGATGTCAAAGAAACTATGATCAAAAGGAAGGGCAAAGTGATTGAGTATTTTGTGGATAACAGTGAAGGTGAAGTTGAAGAACCCAAAAGGATGCATATTGAAGAAAAGAAAGACCTAGCAACAAAGACAATGCATGAAATTGAAGATGCCAATGAAGTCATGCTCAAAAGCAAACACAAGGAGATTGAAAATTTTGCGGATAAAGCTAAAGCTAAAGAATCCAAAATTAGGGAAAGAAAGAAAGACTCAACAAAAGTGACAATGAAAGAAAGTGATGATACCAGAGAAGCAATGGTCAAAAGAAAAGGCAAAGACGTTGAATGTTTTGTGAATAAGGGAGAAGAACCGAAATGGATGCATACGGAAGAAAAGAAGAACTTAACAACCAAGACAAGAGAAGAAAGTGAAGTTATCAGAGAAGCGATGGTCAAAAGAGAAGTGGAAGGAGAGATGGACTATTTTCTGGAAAAGGGAGAAGATGAGAAAGACATACCAAAAGAGAAAATTCAGATAGTTGAGAAGATTAAGCATGGAATTACGGATAATGATCAACGAAATGTGCTAGGAAAAACTACTAAAGGAAAATCTGAAGTACTAACTGAAGAGGGTCCCGAGCTGGTGGGGGGACAAGATGGAAGTAGAGGACTTAAGGTTTCAAACATGGAAGACCCAAAAGAAATTACCAAAGAAGAAATGGCTGAAACAGAAAATTTAATGGAAAAGGTTCAAGGACAAAAGTCTAAGAAGGGCGAAGAAGCAAGGAGAGTTGTTCAGAAAAACACAGCAACTGAGATCTTACAGAAAGAAACTGAGGAGTCCAACAATGAAAGGAAGTCCAGAGAAGGACCAAATGTACCAAACAATATGGTCAAAGTCGTATTTGAAGTGTTGGGGACTTTTCAGGCAAAGCTTCCCAAGAAGGTGATGGAAGCAATTGGCCAAAATAAGGATAAGAATGAATATGTTGCTGTGAAATTGAAAGCAGAGGGGTCTATAAAGATGCATGTTGAACCAAATGAGGCTTTTGATGAGGATCAAACTGAGGAAAGAAGTGAGAAAGAAGTTAGAAAGCCAGAACTCAAGTCTACTGACCAAATAAGTGGGAAAGAGAATGTTAATTTTGGGGTATTTGATGGAAGAAAGAGACCAGAATTTCTAGAGATGGGAGAAACACAAGGCGCAAAAGAAGACAATGCACAAATGGAGGAGTCTGCGAAGAAAATAGATGGAGATCAATATGAGAAGATACAAGTTGAAGAAAAAGGAAGTAAGTCATCTCAGTCATCTCAGAAAGGAAGAGAAGGTCCAAAGATCCAAACGATGTTAAAAGATCAACATCGTTTGCAAGAAGAAAAGGAAAAGCCCTTGGGAAAAACAACAGCAGCAGAAGATAAGAAGCCTAAAATGGGAGAAATAACTCCAGAGTTTGAGAAGGCTAGTGGATTCCAAAAGGCTGCAGAAAATTCGCATGAAAGTACCAAGAGAGAACATCAAATAATGACTCCAAAGAAAGAAGTTGAAAAATCAAAGAAGGAAGAGGATTCTCCTATGCCTACAACAAGGACTTTTGTCACTAAAGAACCTCGTGAGTTATCACTGCCAAGCAAGGACTACAAAATTTCGAAGATAGAGGAAGTACAACAAAAGGAGGGAAAAAGAACCATGCAATTACTAGAAGCAACCACTTCTAAAGAAGGAGAAGTTGCACAGGCCATAGCTACACATTCAAAAGCAAAAGGTGAGATTGATGAGCTACAGGTAAATCAACTACCATCTCCATCTACAGAAATGTGGAGTATAGAACCACATGAATTAGAAAAGTATCCAGTTGCAGATGAAACGGCTGAACCATCAAAATTTCCAAGTTCATCTTCCACTCAACCATTTGAAGTTGAAGGAAAGGATAAGATAAATGCTAGTTGTGATGATGAATCTCAAGATTCAGACATGGACTCTGAAATAGATGGGGAAACATCAAACCAAGGTGAAACAGACGAAGAAGTTGTACAAAGAGAGACATCACAGCCAGAGTCCCCTGAAGATCAACAATGCACCCACAAAGCTCTGGAAGAAAGCAATGGAACACATGAAATAGAAGAAAAGACAGATGAACAAGGAGATGAATCCGATCAGGAAGACTCTGAAGAGTTGGACGAGCAAAAAGAATGTGAGGAGGAAGCCATTGGAGGGAAGAAGGACCAGAAAAGGTCAAAGAAACTTATCATTTCCACCATCATAGCAGGATCAGCCCTTCTTGCTTCTGGAATATTTCTCGTTATTCGACATAGAAGATCCATAAAAGGGTAA 6477 0.3746 MDLELGLKITKTRDDIASISEYRLAKAGPVFQSRETSTAFILTAHLKGFKKNNINIKISEDGSKISVSGEKPVQNILMMGWLMHRKEVDVAGFNKVFKIPDGVKLDGIKAKYDEEEWIMNIIMPKLVKGICGVKIEEVKEDESDGRRSEQEKNEGDHIPSAVGETSQKGSKESEVQEMEESECSMEKKEEVSNKMLDDSNRKITKDTVHKEVEESKVGTDGENEDSFREVGKEEYEVKKTSEPEQKVGVGTSEKIGEASQKEIKELKLKNEDGRVKPSAKGKSVGEGVPKDIGGDTRQDKELKVQEMEGNEGFVEKEEKGASENMLDDANANIIGEVIQKEEESKSEIKDRDGESVKENNVRTGHKGMKISEIEQNVGADVTQNIGDKIQRVSKDSVIEQIGGNKSIEENMEREEPEEMVVEANVSTEGETLGDSKQKQFGEPSSETEDRLNECVKENRMETIKALQLDQNVDDQIPTNIGGISQEGYKESRIQWKKKTKSIKENLEEGKEEFDLMETKGEFPQKLPKGTTEESKRLSVSKMQETEYVKEAKIKTKWKQNEYLVDKDEGEELTRMHKQAKKDLAKNELQENVKEAMGKRERKEIEYFVDKSAGEEHKRRHMEAKKDLTKETMKNNEARMDKREDKEIEYFVEASKDLNTKKIQEIEDIEEEMSKRKDKGIEKFEDKGERKEHNRLYMDAKDFKKGRIQENEDIHEAMIKREGKNNEHFGDKRGENPERMHMESKKNIAKERMQETYDVKEATVKRKGEEIGNFTDKGEGEEPTKMITHAKKELTKETEQENEKVNEAVLKTKDKEIERFVDKGEPKSMNVEPKKGLTAKTMQESENIREAMVKGEGNGYIYFVNKGVSEEPERMHIEPKKDMAKEKLQEEVSKEAMVKIKGKEIENYVVKDGGEENKKMNMKLKKESTKETKQGSENVKEAMGKMKGKETKYSVDKGEGEEPKSLNVEAKKEDDRECKDCECFVDRGEAEETKRMLIEPKNVARETIQEIKGVKEAMVKRKGKEIESLADKDKAGELTKMLAKSNKELTKEKKQQSEKIKEAMVKRKGKETEYFADKGEDKEPKGMYVEEKKDLTTTKTTQESEEPKRMHIKPKDITKDTIPKTAIKETKVKTKDKEIGNFVHKYDGEEHIKMLMKELPKERDKERKKVKEVMVQKKVKETEYSIDKGEDEEPINMHVEAEKDLTSKTIRESEDVRDEVVETGGKDYEYFVDDGESEELKMINTEAKKNTGRESMQETKGAKEAMAKRKGKEIGSFEKGEDKETKKVHVEDKKDLTTVTVEENDGADEGNENKCFSDEGEDEEPKRMYMETKKDFREETLHESENVKNVKVKSEGKDVESFADKSADKESIRMLMGTKRDLTKEEVHGKDDVKETMIKRKGKVIEYFVDNSEGEVEEPKRMHIEEKKDLATKTMHEIEDANEVMLKSKHKEIENFADKAKAKESKIRERKKDSTKVTMKESDDTREAMVKRKGKDVECFVNKGEEPKWMHTEEKKNLTTKTREESEVIREAMVKREVEGEMDYFLEKGEDEKDIPKEKIQIVEKIKHGITDNDQRNVLGKTTKGKSEVLTEEGPELVGGQDGSRGLKVSNMEDPKEITKEEMAETENLMEKVQGQKSKKGEEARRVVQKNTATEILQKETEESNNERKSREGPNVPNNMVKVVFEVLGTFQAKLPKKVMEAIGQNKDKNEYVAVKLKAEGSIKMHVEPNEAFDEDQTEERSEKEVRKPELKSTDQISGKENVNFGVFDGRKRPEFLEMGETQGAKEDNAQMEESAKKIDGDQYEKIQVEEKGSKSSQSSQKGREGPKIQTMLKDQHRLQEEKEKPLGKTTAAEDKKPKMGEITPEFEKASGFQKAAENSHESTKREHQIMTPKKEVEKSKKEEDSPMPTTRTFVTKEPRELSLPSKDYKISKIEEVQQKEGKRTMQLLEATTSKEGEVAQAIATHSKAKGEIDELQVNQLPSPSTEMWSIEPHELEKYPVADETAEPSKFPSSSSTQPFEVEGKDKINASCDDESQDSDMDSEIDGETSNQGETDEEVVQRETSQPESPEDQQCTHKALEESNGTHEIEEKTDEQGDESDQEDSEELDEQKECEEEAIGGKKDQKRSKKLIISTIIAGSALLASGIFLVIRHRRSIKG 2158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g02625 2158 MobiDBLite consensus disorder prediction 292 324 - -
Vimu8g02625 2158 Coils Coil 651 678 - -
Vimu8g02625 2158 MobiDBLite consensus disorder prediction 1244 1366 - -
Vimu8g02625 2158 MobiDBLite consensus disorder prediction 338 368 - -
Vimu8g02625 2158 MobiDBLite consensus disorder prediction 1456 1491 - -
Vimu8g02625 2158 MobiDBLite consensus disorder prediction 2093 2113 - -
Vimu8g02625 2158 SUPERFAMILY HSP20-like chaperones 29 125 IPR008978 -
Vimu8g02625 2158 Coils Coil 585 605 - -
Vimu8g02625 2158 MobiDBLite consensus disorder prediction 1725 1754 - -
Vimu8g02625 2158 MobiDBLite consensus disorder prediction 400 450 - -
Vimu8g02625 2158 MobiDBLite consensus disorder prediction 1765 1811 - -
Vimu8g02625 2158 MobiDBLite consensus disorder prediction 1045 1123 - -
Vimu8g02625 2158 MobiDBLite consensus disorder prediction 1878 1907 - -
Vimu8g02625 2158 Coils Coil 1615 1635 - -
Vimu8g02625 2158 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 21 141 IPR002068 -
Vimu8g02625 2158 MobiDBLite consensus disorder prediction 716 740 - -
Vimu8g02625 2158 MobiDBLite consensus disorder prediction 257 279 - -
Vimu8g02625 2158 MobiDBLite consensus disorder prediction 1184 1221 - -
Vimu8g02625 2158 MobiDBLite consensus disorder prediction 139 158 - -
Vimu8g02625 2158 MobiDBLite consensus disorder prediction 816 842 - -
Vimu8g02625 2158 Gene3D - 26 129 IPR008978 -
Vimu8g02625 2158 MobiDBLite consensus disorder prediction 2073 2092 - -
Vimu8g02625 2158 MobiDBLite consensus disorder prediction 406 420 - -
Vimu8g02625 2158 MobiDBLite consensus disorder prediction 170 243 - -
Vimu8g02625 2158 MobiDBLite consensus disorder prediction 1827 1863 - -
Vimu8g02625 2158 MobiDBLite consensus disorder prediction 1628 1648 - -
Vimu8g02625 2158 MobiDBLite consensus disorder prediction 918 971 - -
Vimu8g02625 2158 CDD ACD_sHsps-like 34 125 - -
Vimu8g02625 2158 Coils Coil 790 814 - -
Vimu8g02625 2158 MobiDBLite consensus disorder prediction 2007 2021 - -
Vimu8g02625 2158 Coils Coil 171 191 - -
Vimu8g02625 2158 MobiDBLite consensus disorder prediction 1574 1615 - -
Vimu8g02625 2158 MobiDBLite consensus disorder prediction 2034 2052 - -
Vimu8g02625 2158 MobiDBLite consensus disorder prediction 516 540 - -
Vimu8g02625 2158 MobiDBLite consensus disorder prediction 139 368 - -
Vimu8g02625 2158 MobiDBLite consensus disorder prediction 614 640 - -
Vimu8g02625 2158 MobiDBLite consensus disorder prediction 1965 2126 - -
Vimu8g02625 2158 MobiDBLite consensus disorder prediction 1628 1677 - -
Vimu8g02625 2158 Coils Coil 1045 1065 - -
Vimu8g02625 2158 MobiDBLite consensus disorder prediction 1655 1669 - -
Vimu8g02625 2158 MobiDBLite consensus disorder prediction 1725 1920 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g02625 Vimu-Chr8 36387715 36394475 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g02625 - - vra:106760392 3643.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu8g02625 8 36387715 36394475 Vimu8g02625 8 36387715 36394475 ECH
Vimu8g02625 8 36387715 36394475 Vimu3g02925 3 43332668 43333320 PCT