Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g02925 ATGGAGGTTGAGTTGGGGCTGAAGATCACAAGAACCAAAGATGATAACACTTCCGTTTCTGATTTTCAGTTTGCCAAAGACAGATCTGGACCTGTCTTTTTTTCCAAAGAAACTGATTCAAAGCTCATCCTCACTGCACATCTTAAAGGGTATAAGAAAGAGGACATTGACATCAATATCAGTAAAGATGGGAGTGAGATTTCGGTGAGTGGGGAGAAGGAGGTGCAGGAAATGCAAATGATACCGTTCAAGAAAGAGGTGAAAACCAAAGGGTTTGCGAAGAAGTTTAGAATTCCTGATAGGGTGGTTTTGGATCGGATAAAGGCTAAGTATAACGAAGTGGATGCAGTGTTGAGAATTGTGATGCCAAAAATGGAATTGGGAAAAGGAATGACAGAAATTGAGGAGGTGGATAGCGTGACGGCAGAGCCAGAAAAGATTGAAGAGGAAACAGCTCCAGTGAAGAAGCCCAAAAAACCATGGACTCCTTCTCCTCCTTTTTATTATGGAGGATCAACTTTGCTTCTAACTCTTCTATTTCTTGTAATGCACTATATTAGAGCCAGAAAGAGTTAA 576 0.4097 MEVELGLKITRTKDDNTSVSDFQFAKDRSGPVFFSKETDSKLILTAHLKGYKKEDIDINISKDGSEISVSGEKEVQEMQMIPFKKEVKTKGFAKKFRIPDRVVLDRIKAKYNEVDAVLRIVMPKMELGKGMTEIEEVDSVTAEPEKIEEETAPVKKPKKPWTPSPPFYYGGSTLLLTLLFLVMHYIRARKS 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g02925 191 Pfam Hsp20/alpha crystallin family 36 128 IPR002068 -
Vimu3g02925 191 PANTHER HEAT SHOCK PROTEIN 26 1 160 - -
Vimu3g02925 191 SUPERFAMILY HSP20-like chaperones 31 129 IPR008978 -
Vimu3g02925 191 Gene3D - 9 135 IPR008978 -
Vimu3g02925 191 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 23 143 IPR002068 -
Vimu3g02925 191 CDD ACD_sHsps-like 36 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g02925 Vimu-Chr3 43332668 43333320 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g02925 - - gmx:100779509 272.707
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu8g02625 8 36387715 36394475 Vimu3g02925 3 43332668 43333320 PCT