Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g02229 ATGAAGAAAGTAGTGTTGAAGGTGGACTTGCATGGTGATAGAATCAAGCAGAAAGCCATGCAGACAGTATCTGGCCTTTCAGGGATTGAATCGGTTTCTGTTGATGTGAAAGACATGAAATTGATCTTGTTGGGTGACATTGATCCAGTGAATGCAGTGTCGAAGCTAAGAAAGTTGTGTCATACTGAAATAGTTTCAGTTGGACCAGCAAAAGAGGAGAAAGATAAGAACGAGGCAGCAAAGTTAGCTGTTCCTCTAAAACTCAACGAAGCATACTATCCACTTTATTATCAGATGACTCCACAGTATAGTCAAAGTTACTATGTCACAAGTTACGATGAAAATCCTAATACCTGTGTCATCTGCTAA 369 0.3957 MKKVVLKVDLHGDRIKQKAMQTVSGLSGIESVSVDVKDMKLILLGDIDPVNAVSKLRKLCHTEIVSVGPAKEEKDKNEAAKLAVPLKLNEAYYPLYYQMTPQYSQSYYVTSYDENPNTCVIC 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g02229 122 Gene3D - 1 73 - -
Vimu8g02229 122 ProSiteProfiles Heavy-metal-associated domain profile. 1 68 IPR006121 GO:0046872
Vimu8g02229 122 PANTHER COPPER TRANSPORT PROTEIN FAMILY-RELATED 2 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g02229 Vimu-Chr8 29051606 29052177 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g02229 - - pvu:PHAVU_004G107000g 212.231
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu8g02229 8 29051606 29052177 Vimu8g02229 8 29051606 29052177 ECH
Vimu3g02995 3 43972735 43973611 Vimu8g02229 8 29051606 29052177 PCT