Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g02995 ATGCTCCTCAAGCCTATCTTCATATCACAACTTCCTTTTCAAATTGAAAAATCAACTCTTCCTCATTCACATATTTTTTCAACTCCGTTTTCTCTTTCGCGTTTTTCACTAACATTTCTGCTTTCATCTCAGCTCTCACAAACTTCAGCAACTATGAAGAAAGTTGTGTTGAAGGTGGATGTACATGAAGACAAAATCAAGCAAAAGGCTATGAAGGCTGTCTCTGGCATTTCAGGTGTGGAGTCAGTTTCTGTGGACATGAAAGACAAGAAATTGACCTTGATTGGGGACATTGATCCAGTACAAGTAGTTGCCAAGCTAAGGAAGTTCTGTCACGCTGACATAGTTTCTGTTGGACCTGCAAAAGAGGAAAAGAAAGAAGAACCTAAGAAGGATGATAAAAAGAAGGAAGATGAAAAGAAAGATTCTACAAAAGAAATTGTTGCAGATCCACTCAAATTCTATCAAACGTATGGATACTATTATCAGATGAAACCACAATACAATCCGTATTACAGCGCCATAAGTGTGGAAGAGGATCCTAATGGCTGTGTCATTGTCTAA 564 0.3812 MLLKPIFISQLPFQIEKSTLPHSHIFSTPFSLSRFSLTFLLSSQLSQTSATMKKVVLKVDVHEDKIKQKAMKAVSGISGVESVSVDMKDKKLTLIGDIDPVQVVAKLRKFCHADIVSVGPAKEEKKEEPKKDDKKKEDEKKDSTKEIVADPLKFYQTYGYYYQMKPQYNPYYSAISVEEDPNGCVIV 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g02995 187 SUPERFAMILY HMA, heavy metal-associated domain 51 110 IPR036163 GO:0046872
Vimu3g02995 187 Gene3D - 48 124 - -
Vimu3g02995 187 PANTHER COPPER TRANSPORT PROTEIN FAMILY-RELATED 53 184 - -
Vimu3g02995 187 MobiDBLite consensus disorder prediction 121 144 - -
Vimu3g02995 187 CDD HMA 72 109 IPR006121 GO:0046872
Vimu3g02995 187 ProSiteProfiles Heavy-metal-associated domain profile. 52 119 IPR006121 GO:0046872
Vimu3g02995 187 Pfam Heavy-metal-associated domain 58 109 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g02995 Vimu-Chr3 43972735 43973611 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g02995 - - vum:124842115 217.238
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu3g02995 3 43972735 43973611 Vimu8g02229 8 29051606 29052177 PCT