Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g02153 ATGGCACTAGCAGCTACTTCAAAAGTTGTTCTTGGTTCAGTAGCCTTTTTAATCTTCTGGGTACTAGCAGTTTTCCCAGCTGTGCCTTTCTTACCCATTGGGAGAACTGCAGGGTCTTTGTTGGGTGCAATGCTAATGGTCATATTCAAAGTTCTAAGTCCAGATGAAGCTTATGGTTCAATTGATCTTCCAATTCTTGGTCTTCTTTTTGGGACAATGCTTGTTACTATTTTTCTTGAAAGAGCAAACATGTTCAAGTACTTGGGGAAATTGCTCTCTTGGAAAAGTAGAGGACCAAAGGACTTACTCTGCAGAATCTGTTTGATTTCTGCTATATCAAGTGCTTTCTTCACAAATGACACTTCTTGCATTGTGCTAACTGAATTTGTGCTGAAAATTGCAAGGCAGCATGACCTTCCACCCTACCCTTTTCTTCTTGCACTTGCTTCAAGTGCTAATATTGGATCTTCAGCAACCCCTATAGGGAACCCCCAAAATCTGGTTATAGCAATTCAGGGTAAAATATCATTTGGGAGGTTTCTGATGGGAATTCTTCCAGCTATGATTGTAGGAGTTATAGTGAATATTCTTTTTCTCATAGCCATGTATTGGAAGGTACTATGTAGTCCTAAGGATGAAGAGAATCCAATTTCAGAAGTTGTAGTAGAAGAGGAAGCTGTTTCCCATCAGTTTTCTCCAGCCAGAATGTCTCATTTGACACCTTTGAATCCTCAAGAATGCAATGGAAGTATAGAACTTGGTAATACTGTTCAAAACTCTTCTCATGCATTGGTTTCTTCTCAAGTTCATGTTATTAAAGACCAATCAGCAACAAGTGTAAGTGAAGTTCAGATGGAAACCAATCCTTCAAAAAATGTTGCAATAGTAGTAGATAAACCTGTTGTGGCACATGTTGTGCCATCTTCAGATGGAAAGGACTATATGAATGTAAAATGGAAAAGGATACTGTGGAAATCTTGTGTTTATGCAATCACATTGGTAATGCTGATTGCCATGCTTCTTGGTTTGAATATGGCATGGACTGCAATTGCAGCAGCAATAACTTTGGTGGTTCTTGATTTCAAAGATGCAGGGCCAAGCTTAGACAAGGTATCATATTCACTTTTGATATTCTTCTGTGGAATGTTTATCACAATAGAAGGGTTTAAGAAAACTGATATTCCAAGTGCTATGTGGGATGTAATGGAACCCTATTCTCGCATAGATCATGCTACTGGAACAGCTATTCTTGCTGTAGTTATACTTGTCCTATCAAATTTGGCTTCCAATGTTCCAACTGTTCTATTGCTTGGAGCAAGAGTTGCAGCCTCAGCTGCTGCAATTTCGAAAGCAGATGAACAGAAGGCATGGCTAATCTTAGCTTGGGTTAGCACCATAGCAGGGAACTTTTCATTGTTAGGATCAGCTGCTAACTTGATAGTGTGTGAGCAAGCTCGTCGTGCTCCAAACCTTGGATATACTCTATCCTTTTGGACTCACCTAAAATTTGGACTTCCTTCTACTCTTATAGTCACTGCAATAGGGTTGACACTCATAAGATGA 1563 0.3948 MALAATSKVVLGSVAFLIFWVLAVFPAVPFLPIGRTAGSLLGAMLMVIFKVLSPDEAYGSIDLPILGLLFGTMLVTIFLERANMFKYLGKLLSWKSRGPKDLLCRICLISAISSAFFTNDTSCIVLTEFVLKIARQHDLPPYPFLLALASSANIGSSATPIGNPQNLVIAIQGKISFGRFLMGILPAMIVGVIVNILFLIAMYWKVLCSPKDEENPISEVVVEEEAVSHQFSPARMSHLTPLNPQECNGSIELGNTVQNSSHALVSSQVHVIKDQSATSVSEVQMETNPSKNVAIVVDKPVVAHVVPSSDGKDYMNVKWKRILWKSCVYAITLVMLIAMLLGLNMAWTAIAAAITLVVLDFKDAGPSLDKVSYSLLIFFCGMFITIEGFKKTDIPSAMWDVMEPYSRIDHATGTAILAVVILVLSNLASNVPTVLLLGARVAASAAAISKADEQKAWLILAWVSTIAGNFSLLGSAANLIVCEQARRAPNLGYTLSFWTHLKFGLPSTLIVTAIGLTLIR 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g02153 520 CDD YbiR_permease 28 519 - -
Vimu8g02153 520 PANTHER TRANSPORTER ARSB-RELATED 1 519 - -
Vimu8g02153 520 Pfam Citrate transporter 27 467 IPR004680 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g02153 Vimu-Chr8 27871326 27873507 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g02153 - - vun:114182584 908.286
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu8g02153 8 27871326 27873507 Vimu3g03015 3 44107417 44110835 ECH
Vimu8g02153 8 27871326 27873507 Vimu8g02153 8 27871326 27873507 ECH
Vimu3g03015 3 44107417 44110835 Vimu8g02153 8 27871326 27873507 PCT