Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g02149 ATGGCACTGGCTCCTCCTCCAACAGTTGTCCTTGGTTCAGTAGCCTTTGCAGTCTTCTGGGTTCTAGCCGTTTTCCCATGTGTGCCTTTTCTACCTATTGGGAGAACTGCAGGGTCCCTACTTGGTGCAATGCTTATGGTCATATTCCAAGTTCTGACACCAGATCAAGCTTTTGCTGCAATTGATATTCCAATTCTTGGTCTTCTATTTGGCACAATGGTTGTTACTGTTTTTCTTGAAAGAGCAGACCTGTTCAAGTACTTGGGGAAGCTGCTCTCATGGAAAAGTAGAGGACCAAAAGACTTACTTTGTAGAATCTGTGTGATTTCTGCTATTTCAAGTGCTTTTTTCACCAATGACACCTCTTGTGTTGTGCTGACTGAATTTGTGTTGAAAATTGCAAGGCAGCATAACCTCCCACCTTACCCTTTCCTTCTTGCACTTGCTTCAAGTGCTAATATTGGCTCCTCAGCAACCCCAATTGGGAACCCCCAGAATCTGGTTATAGCTATTCAAGGCAAAATATCATTTGGGAGTTTTCTAACTGGCATTCTTCCAGCTATGCTTGTAGGACTTGTGGTGAATGTTGTAATGCTTATAGTCATATATTGGAGGGCGTTAACTATTCACAAGGATGAAGAGGATCCAATTTCACAAGTGGCAGAAGAGGAGATTATGTCTCATCAGTTTTCTCCAGCCATAATGGCTCATTGTGCATCATTTAATTCTGAAGAATGCAGTGACAGTTCAGAACCAACTAATAATCTTCAGAACTCTTCTCAAGTTCACGCTATGACAAACCAAACAGTGCCAAGTTTAAGTGAAGTTCAGATGGGTGTTAGTAGCACAAACTCAAAGGATTCCACAACAACTACAAATGCATCCAAGGAGGGGACCAGTGACACCAATCCTTCAAAAGATGTTTCAATAGTAGTGGATAGACCTATAGAAGCACGTATTATGCACTCTTCACAAGGAAAGGAGGACTATTTGAGCATAAAATGGAAAAGGATGCTATGGAAATCTTGTGTTTATGCAATCACATTGATGATGTTGACTGCAATGCTTCTTGGTGTAAATATGGCATGGGCTGCAATTGCAGCCGCAATAATTTTGGTGGTGCTTGATTTCAAAGATGCAGGACCTAGCATAGACAAGGTCTCTTATTCCCTTTTGATATTCTTCTGTGGAATGTTTATAACAGTAGATGGCTTCAAGAAAACTGGAATTCCAAGTGCTCTGTGGGACTTAATGGAGCCTTATTCCAGGATAGATCATGCTACTGGAATAGCTATACTTGCTGTAGTTATACTTGTCCTATCAAATTTGGCTTCAAATGTACCAACTGTTCTGTTGCTTGGAGCAAGAGTTGCAGCCTCAGCTGCTGCAATTTCCAAAGAAGATGAGAAGAAGGCATGGCTAATCCTAGCTTGGGTGAGCACTATAGCAGGAAACTTTTCACTATTAGGATCTGCTGCAAACTTGGTTGTGTGTGAACAAGCTCGTAGAGCTCCAAACATTGGATACACATTAACTTTTTGGACTCATCTCAAATTTGGTCTTCCTTCAACTCTCATAGTCACTGCTATTGGATTAACCCTCATAAGATGA 1611 0.4128 MALAPPPTVVLGSVAFAVFWVLAVFPCVPFLPIGRTAGSLLGAMLMVIFQVLTPDQAFAAIDIPILGLLFGTMVVTVFLERADLFKYLGKLLSWKSRGPKDLLCRICVISAISSAFFTNDTSCVVLTEFVLKIARQHNLPPYPFLLALASSANIGSSATPIGNPQNLVIAIQGKISFGSFLTGILPAMLVGLVVNVVMLIVIYWRALTIHKDEEDPISQVAEEEIMSHQFSPAIMAHCASFNSEECSDSSEPTNNLQNSSQVHAMTNQTVPSLSEVQMGVSSTNSKDSTTTTNASKEGTSDTNPSKDVSIVVDRPIEARIMHSSQGKEDYLSIKWKRMLWKSCVYAITLMMLTAMLLGVNMAWAAIAAAIILVVLDFKDAGPSIDKVSYSLLIFFCGMFITVDGFKKTGIPSALWDLMEPYSRIDHATGIAILAVVILVLSNLASNVPTVLLLGARVAASAAAISKEDEKKAWLILAWVSTIAGNFSLLGSAANLVVCEQARRAPNIGYTLTFWTHLKFGLPSTLIVTAIGLTLIR 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g02149 536 PANTHER TRANSPORTER ARSB-RELATED 1 535 - -
Vimu8g02149 536 MobiDBLite consensus disorder prediction 276 307 - -
Vimu8g02149 536 Pfam Citrate transporter 27 483 IPR004680 GO:0016020|GO:0055085
Vimu8g02149 536 CDD YbiR_permease 28 535 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g02149 Vimu-Chr8 27836207 27838094 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g02149 - - gmx:100792256 867.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu8g02149 8 27836207 27838094 Vimu3g03015 3 44107417 44110835 PCT