Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g02129 ATGTGGTGGCTGTTCGGAAGAAAAAACGGTTCTGGTTTTTCATCTTCTTCTACTGCTGAGGAAGTCACTCAAGGGATCGATGGCAGCAACCTTACTGCTATTGTTACAGGTGCAACCAGTGGCATTGGCGTTGAAACTGCTCGTGTTCTTGCAATGCGTGGTGTTCATGTAATAATGGGAGTCAGAAATTTGGTTACTGCAAAAGATGTAAAAGAAGTAATACTTAAAGAGATTCCTACTGCTAAACTTGATTACATGGAATTAGACCTTAGTTCAATGGCATCTGTTCGAAAATTTGCATCAAATTTCATTTCATCTGGTCTTCCATTAAACATTCTTATAAACAATGCAGGAATTTTCGGAACCCCTTTCACTCTGTCTGAAGACAACATTGAACTGCAATTTGCCACAAATCACATTGGTCCTTTCCTATTAACAAATCTGTGTTTGGATATTATGAAGAAAACAGCTCACGAAAGTAAGAAACAAGGAAGAGTCGTTAATGTCTCCTCTATAGCTCATCACGAAGAAGGGGTAGATATTACAGCCAATTCTCTTCATCCAGGAGTTGTTCTCACCAATATTTTTCGTCACACCATACTGTCTGGTTTAATTAATACGGTGGGTAGACTTGTCTTTAAAAATGTCCAGCAGGTGGTAAGGGTGGCAGTTAGTCGGAAACATGCTGGTCCTAGCAGTGGCCATGGAGGATCTATCGAAGAAGGGGATAAGAAACTGTCTTTCTCTTTTGATTGA 756 0.3995 MWWLFGRKNGSGFSSSSTAEEVTQGIDGSNLTAIVTGATSGIGVETARVLAMRGVHVIMGVRNLVTAKDVKEVILKEIPTAKLDYMELDLSSMASVRKFASNFISSGLPLNILINNAGIFGTPFTLSEDNIELQFATNHIGPFLLTNLCLDIMKKTAHESKKQGRVVNVSSIAHHEEGVDITANSLHPGVVLTNIFRHTILSGLINTVGRLVFKNVQQVVRVAVSRKHAGPSSGHGGSIEEGDKKLSFSFD 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g02129 251 Gene3D - 24 244 - -
Vimu8g02129 251 MobiDBLite consensus disorder prediction 227 251 - -
Vimu8g02129 251 PANTHER RETINOL DEHYDROGENASE 178 231 - -
Vimu8g02129 251 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 31 222 IPR036291 -
Vimu8g02129 251 Pfam short chain dehydrogenase 32 177 IPR002347 -
Vimu8g02129 251 PRINTS Glucose/ribitol dehydrogenase family signature 158 174 IPR002347 -
Vimu8g02129 251 PRINTS Glucose/ribitol dehydrogenase family signature 32 49 IPR002347 -
Vimu8g02129 251 PRINTS Glucose/ribitol dehydrogenase family signature 108 119 IPR002347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g02129 Vimu-Chr8 27618959 27625564 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu8g02129 34 220 Acyl Lipid Metabolism Gene Families AT3G55290 31.004 2.19e-12 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g02129 - - gmx:100794358 327.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu8g02129 8 27618959 27625564 Vimu3g03019 3 44132395 44136628 PCT