Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g02127 ATGTGGTGGCTGTTCGGAAGAACAAACGGTTCTGGTTTTTCATCTTCTTCTACCGCCGAGGAAGTCACTCAAGGGATCGATGGCAGCAACCTTACTGCTATTGTTACAGGTGCAACCAGTGGTATTGGTGTTGAGACTGCTCGTGTTCTTGCGATGCGTGGTGTTCATGTAATAATGGGAGTCAGAAATTTGGTTACTGCAAAAGATGTAAAAGAAGTAATACTTAAAGAGATTCCTACTGCTAAACTTGATTACATGGAATTAGACCTTAGTTCAATGGCATCTGTTAGAAAGTTTGCATCAAACTTCATTTCATCTGGCCTTCCATTAAACATTCTTATGAATTTTCGCAGCCCCTTTCACACTGAAGAAGGGGTAGATATTACAGCTAATTCTCTTCATCCAGGAGCTGTTATCACCAATATTTTTCGTCACACCAATATACTGTCTGGTTTAATTAATACAGTGGGTAGACTTGTCTTTAAAAATGTGCAGCAGGGAGCTGCAACAACATGCTATGTAGCATTGCATCCACAAGTGAGGGAAATCAGTGGCCACTATTTTCAAGATTGTAATGTTTCCACAGAAAATTCACAAGCAAGGAACCCTGAATTGGCCAAGAAATTATGGGATTTTAGCTTAAACCTCATCAAGTAG 657 0.4003 MWWLFGRTNGSGFSSSSTAEEVTQGIDGSNLTAIVTGATSGIGVETARVLAMRGVHVIMGVRNLVTAKDVKEVILKEIPTAKLDYMELDLSSMASVRKFASNFISSGLPLNILMNFRSPFHTEEGVDITANSLHPGAVITNIFRHTNILSGLINTVGRLVFKNVQQGAATTCYVALHPQVREISGHYFQDCNVSTENSQARNPELAKKLWDFSLNLIK 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g02127 218 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 29 188 IPR036291 -
Vimu8g02127 218 Gene3D - 123 218 - -
Vimu8g02127 218 Pfam short chain dehydrogenase 32 115 IPR002347 -
Vimu8g02127 218 Gene3D - 29 122 - -
Vimu8g02127 218 PANTHER RETINOL DEHYDROGENASE 124 218 - -
Vimu8g02127 218 PRINTS Glucose/ribitol dehydrogenase family signature 32 49 IPR002347 -
Vimu8g02127 218 PRINTS Glucose/ribitol dehydrogenase family signature 126 143 IPR002347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g02127 Vimu-Chr8 27585703 27591812 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g02127 - - ghi:107907962 265.774
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu3g03019 3 44132395 44136628 Vimu8g02127 8 27585703 27591812 PCT