Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g02114 ATGGCTTCCTTCACGTGCTCCCCCACCTCCCTCCAGCTTCGATTGGCCTTCGCCGCACCCAAATTCCCCCTTACCCCGCACTTGCGAATGCGCAACCTCAAAACGAATCGCTTTCGCCCTCTACGGGCCGAGCGGGACGGTGCCGCCTCGGAGTGGACTGGGTCCGGGCTAAACCTCGACGGCTTCTCCGGCTGGTCCGACACCGACGCCGAGCAACAGAACGACAAGAAGGAGTCCTATGGAGGAGTTGTGGGAGTAGGATTGGCTGGAGTGCTTCTCCTTTCAGGGCTTACCTTTGCTGCCTTATCTCTGGGCAAAAAAACCGGTTCCAGACCAGAGCAGCACATGAAGCCCTTGACTACCCAGCAGGAGGAAATTTTGTCTTCTGATGATCATAATAATGAAACAACAGAACAAGCAAATGTTGATAAGGTGGAGCAAGGAAATGATAAAATAGAAGGTCAGATCGATATGTCCAATGATTATTCATCTTCTGAGTCGGGTAATATTTACCGTGACTATAGTATTGTTGATGATTCTGATATAGGATCCCAGTCGATATATGATAGTAAAAACCCCTCCGTTGATGTTGATGATGCCACTAAACATATATTTGTTCAAGAAGACTTACAGCATGAGTCAGCTTTTGATAACAAGTTAGTTTTTGCCAGTAAAAGCCCAGTCTCACTTGAATCTGAAAATACTGTTGATTCTTTTAATGCTAATGGATTTAGAGATTTTGATAGCAACCCTGCTGTAGATACAGCAGAATCTACTGCCAATCTTAAAGAAAACCTATTCAATGTTGATCCAGGAGATCTGCCCAACTACGATTGTGCTGAACCACCACACCTTAATGCTGTTCAGCATGATGAAATAACCAGTTCAAGTGGAAGTGTTAGTTTTGGTTTTAGCGAAACCTATTCTAGTTCAGGTGCTGATAACGAGACTGAAATTGTTAGTGTTGTGGTCAGTCCCGAGTCAAATAACACGATTTCAGATCATAAGTTTTTCAATGAGGCTGTTGAAGAAAATATTCTGTCAGCTTCAAAGAAAGAAAGCCTTGATCTGAACAAAATTCCACAGGTCTCTGCTGAGGGAAATGAGCCATCCCTCGAAGAGTGGAGCATTCCTGGAAATGATGTGTTTGAAGAATCACCTGTTTTATTATCAGCCAATGCACTGGTAGATGAGAAGGTTATGAATGATAATTACGAGGTTGATGAAGTTAAATCTGAATCTCCAAATTTTGGATCCTTTTTCTCTGTTCCTGGTATTCCCGCTCCATCAGTAGTTTCTGCAACTGCACAAGTGTTTCCTGGAAAGGTTTTAGTTCCTGCAGCTGTTGATCAAGTCCAGGGGCAAGCACTTGCTGCACTGCAAGTTCTAAAGGTCATTGAGCCTGATGTTCAACCTAGTGATTTATGTACTCGTCGTGAATATGCTCGCTGGTTGGTGTCTGCTAGCAGCACTCTTTCAAGGAGCACTGTTTCGAAAGTGTATCCGGCCATGTACATAGACAATGTTACTGAGCTTGCATTTGATGATGTCACCCCGGACGATCCTGATTTTTCTACCATTCAAGGCTTGGCAGAAGCTGGACTTATTGAGAGCAGGCTTTCAAGACAAGATATACAGTTGTCTGGTGATGAAGATGATAGTCCATTTTACTTCTCCCCTGGAAGTCCTTTATCGCGTCAAGATCTTGTCAGTTGGAAAATGGCCCTGGAGAAAAGACAGCTTCCAGATGCTGACAGAAAGACACTGTACCAACTTTCTGGTTTTCTGGACACTGATAAGATACATCCTAATGCATGCCCTGCCCTAGTAGCTGATCTATCTGCTGGCGAGCATGGAATAATAGCTCTTGCTTTTGGTTATACAAGATTGTTCCAGCCAGATAAGCCAGTAACAAAAGCCCAAGCAGCTATGGCTCTAGCTACTGGAGAAGCTTCTGAAATAGTTAGTGAAGAGCTTGCACGCATCGAAGCAGAATCTATTGCTGAAAATGCTGTTGCTGCTCATAGTGCTTTAGTAGCTCAGGTAGAGAAGGATATCAATGCAAGTTTTGAGCAGGAGCTTTTATTAGAGAGGGAAAAGATCAATGCTGTTGAAAAAATGGCTGAGCAGGCAAGACTCGAGTTAGAAAGGTTAAGAGCTGAGAGAGAAGAGGATAACCTTGCATTGACAAAGGAGCGTGCTGCTATTGACTCAGAAATGGAGGTTTTTTCAAAGTTAAGGCATGAGGTTGAGGATCAATTACAAATCCTTATGAATGACAAGGTAGAAATAGCACATGAAAAAGAGAGGATTAACAAACTCCGGGAACAAACAGAAGTTGAAAACAAGGAGATTGCTCGTTTACAATATGAGCTAGAGGTAGAACGTAAAGCCCTGTCTATGGCCAGGGCTTGGGCAGAGGATGAGGCCAAACGAGTGAGAGAGCAAGCAATAGCCTTAGAAGAGGCTAGAGATCGTTGGGAGAGGCATGGGATCAAAGTGGTAGTTGACGATGACCTCCGCAAGGAGGCCTCCGCTGGAGTTACATGGCTCAATGCCTCAGAGCAGATTTCGGTTCAAGGAACAGTCGACAGGGCCGAGAACTTATTGGACAAGCTCAAACTAATGGCATCAGATATCAGAGGAAAATCTAGAGACATACTTGACAAAATCATCCACCTGGTCTCCCAATTTATATCAAAATTGAGGGAATGGGCATCCAGAACTGGAAAACAAGCTGAAGAATTTGGAGAAGCTTCCATATCAAAGGTAGGTAAGTCAGCCAGTGAGTTGCAACAAAGTGCTATTGAAGTTGGATTTGGTATCAAAGAAGGTGCAAAGCGTGTTGCTGGTGATTGTAGAGAAGGGGTTGAGAAAATCACTCAAAAATTCACACAGAAGTTCAAGACCTGA 2913 0.4394 MASFTCSPTSLQLRLAFAAPKFPLTPHLRMRNLKTNRFRPLRAERDGAASEWTGSGLNLDGFSGWSDTDAEQQNDKKESYGGVVGVGLAGVLLLSGLTFAALSLGKKTGSRPEQHMKPLTTQQEEILSSDDHNNETTEQANVDKVEQGNDKIEGQIDMSNDYSSSESGNIYRDYSIVDDSDIGSQSIYDSKNPSVDVDDATKHIFVQEDLQHESAFDNKLVFASKSPVSLESENTVDSFNANGFRDFDSNPAVDTAESTANLKENLFNVDPGDLPNYDCAEPPHLNAVQHDEITSSSGSVSFGFSETYSSSGADNETEIVSVVVSPESNNTISDHKFFNEAVEENILSASKKESLDLNKIPQVSAEGNEPSLEEWSIPGNDVFEESPVLLSANALVDEKVMNDNYEVDEVKSESPNFGSFFSVPGIPAPSVVSATAQVFPGKVLVPAAVDQVQGQALAALQVLKVIEPDVQPSDLCTRREYARWLVSASSTLSRSTVSKVYPAMYIDNVTELAFDDVTPDDPDFSTIQGLAEAGLIESRLSRQDIQLSGDEDDSPFYFSPGSPLSRQDLVSWKMALEKRQLPDADRKTLYQLSGFLDTDKIHPNACPALVADLSAGEHGIIALAFGYTRLFQPDKPVTKAQAAMALATGEASEIVSEELARIEAESIAENAVAAHSALVAQVEKDINASFEQELLLEREKINAVEKMAEQARLELERLRAEREEDNLALTKERAAIDSEMEVFSKLRHEVEDQLQILMNDKVEIAHEKERINKLREQTEVENKEIARLQYELEVERKALSMARAWAEDEAKRVREQAIALEEARDRWERHGIKVVVDDDLRKEASAGVTWLNASEQISVQGTVDRAENLLDKLKLMASDIRGKSRDILDKIIHLVSQFISKLREWASRTGKQAEEFGEASISKVGKSASELQQSAIEVGFGIKEGAKRVAGDCREGVEKITQKFTQKFKT 970
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g02114 970 Coils Coil 863 883 - -
Vimu8g02114 970 Coils Coil 694 735 - -
Vimu8g02114 970 Coils Coil 757 791 - -
Vimu8g02114 970 Coils Coil 803 830 - -
Vimu8g02114 970 PANTHER GPI-ANCHORED ADHESIN-LIKE PROTEIN 1 964 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g02114 Vimu-Chr8 27432657 27443632 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g02114 - - gmx:100780360 1568.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu8g02114 8 27432657 27443632 Vimu3g03027 3 44178859 44184331 PCT