Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g03027 ATGGCATCGATCACTACTCCAGGTTCTCTTCAAATTCGATTAGCATTCACTCCCTTCAATTCCACGAAAATAAACCCAATTTTTTTCCACACGCGCTTCACCAACGTCGATCATCGTCGCGTTCGCCTTCTCTGCGTTGCAAATCACGGAAACGGGTCGGGTTCTGTTCCTATTCGGTCCGGGTCGGATAACCGTTCCGTTTCGGAGTTTAAGAAGAACCAATCATATGGAGGAGTTGTGGGAGTGGGTGTGGCTGGAATCTTTCTTCTTTCAGGGATTGCTTTTGCTGCCTTCCTTGTAAGCATGCGAAACGGTGCCAGACAAGTGAAGCCCCTGAATACACATCAGGGAGTGCTTTTATCTTCTGATGATTGTAATGACAAAACAGAAAATGTAAACGCTGACAACAGGGTGGAGCAAGGAGATATTAATGTAGAAGGTCATACAGATATATCCCGGGGTTGTTTATCTCCTGAGTCGGATAAGATTCCCAATGGCCATAGAATTGTTAATGATTTTGACATAGAATCCCAGTTGGTTCGTGATATTCATAACATAGATGATAATGCTGATGCCATCATATACATATCCGTTCAAGAAGAACTACAGCATGGATCAGTTGTTGATGATGGGTATGTTGTTCCCAGGGAGGGTACAGTGGCACTTAATGATCCTGAATCTGAAACTCCTATTGATTCTTTGGATAGTTATAGATTTAAAGATTTTGATAGCAGCTCTGCTGTAGATACAGATAACTCTACTACTGAGCTTAAGGAGAACCCATCCTTCATTGAACCAAGAAACATGTCCAACATTGATGCCGAGCCCCTACCAATTATATGTGAGCAGCAGGATGAAATTATCGGTTCAAGTGGCAATAGAAGTTCTGCTACTTTTGATACTTTAAGTTTCGTAGCTGATGATGAAAGTGTACCAGTCAATATTGATTTCAGTACTCAGTCAAATAAGACAACTTCAGATCCTGAGGTTTTTCTTGAAGAGGATGATCCATCAGTTTCAACCAAAGGAAATCTTGATCTGAACAATATGCCGCAGGTTTCAGACAAGTCATCCTTTGAGGAGCAGAACTTTTCAGAAGATGACCTGTTGACAAAATCAAAAGTCTCATCAATTAATACATTTGTAGATGGACAGGTAAAAAATGATGATAATGAGGTTAATAAATCTAGATCTGAATCTTCAAATCCTGGAGCCTTTTACTCTGCGCCTGGTATTCCTGCTCCATCAGTAGTTTCTGCAGCTGTAGAGGTGTTTCCTGGAAAGGTTTTAGTTCCTGCAGTTGTTGACCAAGGCCAGGGACAAGCATTAGCTGCTTTGCAAGCTCTGAATGTGATTGAGTCTGATGTTGAACCCAGTGATTTATGCACACGCCGTGAGTATGCTCGATGGTTAGTGTCTGCTAGCAGTGCTCTGTCAAGGAAAACAATCTCAAAGGTATTTCCTGCCATGTACATAGAAAATGTTACTGAGCTTGCATTTGATGATATCACCTCTGAGGACCCAGATTTTTCTTCCATTCAAGGCTTGGCAGAAGCTGGACTTATTGAAAGCAGGCTTTCAAGATCATTGGCTGTGATTGTGATTCCCTTCTCTCTTATATGCATTTCTCGCAGCCCTTTATCACGTCAAGATCTTGTTAGTTGGAAAATGGTCCTAGAGAAAAGACAGCTTCCAGAAGCAGATGGAAAGATGCTGTACCAGCTTTCTGGTTTTATAGATGCTGGTAAGATACACTCTGATGTAATCCCTGCACTTGTTGCTGATGTATCTGCTGGGGAGCATGGAATAACAGCTCTTGCATTTGGTCATACACGATTGTTCCAGCCACATAAACCTGTGACAAAGGCCCAAGCAGCTGTAGCTCTTGCTACTGGAGATGATTTTGACATAGCTAATAGAGAGCTTGCACGCGTTGAGGCAGAATCTTTGGCCGATAACGCTGTTGCTTCTCATAGTGTTTTAGTAGCTCAAGTTGAGAAGGATATCAATGCAAGTTTTGAACAGAAGCTTTCCATAGAGAGGGAAAAGATCAGTGTTGTTGAAAGATTGGCCAGAGATGCAACATGCGAGTTGGAAAGGTTGAGGGCTGAGAGAGAAGAAGACAGAATTTGCTTCATAAAGGAACGAGCTGCTATTGAATCAGAAAGGGTTGTTTTTTCTAGGTTAAGGCTTGAGACGGAAGATCATCTACAAAACATTATGAGTGACAAGGTTAAAATAGCTCATGAAAAAGAGAGGATTAGTAAGCTTCGGGAGCTGGCAGAAAATGAAGAGAAGGAAATTAAGCGAGTGCAGTATGAGCTAGAGGTTGAACGGAAAGCTTTGTCAATGGCAAGGGCATGGGCAGAGGATGAGGCAAAACGAGTAAGTGCATATGCAGTGGGCTTGGAGAGGGCTAGAGATCGTTGGGAGAGGAATGGAATCAAAGCAGTGGATGATAACTTCCTTGAGGAGCAATTATCGGTTAAAGATACGAGCTCGAGATATGATGACGAGATTATTCTTATAATTTCTCAATTCGTATCAAGATTGAAAGAGTGGATAAGCAAATCTGGAAAACAAGCTGAAGAATTGAGAGAAACTCTTATCGCAAAGGCAGGCAAGTCAGCTCATGAGGCAAAGCGAGTTGCGGGTGATTGTATAGAAAGAGTTGAGAAGCTCACTCAAAATTTCAGGACCTGA 2703 0.421 MASITTPGSLQIRLAFTPFNSTKINPIFFHTRFTNVDHRRVRLLCVANHGNGSGSVPIRSGSDNRSVSEFKKNQSYGGVVGVGVAGIFLLSGIAFAAFLVSMRNGARQVKPLNTHQGVLLSSDDCNDKTENVNADNRVEQGDINVEGHTDISRGCLSPESDKIPNGHRIVNDFDIESQLVRDIHNIDDNADAIIYISVQEELQHGSVVDDGYVVPREGTVALNDPESETPIDSLDSYRFKDFDSSSAVDTDNSTTELKENPSFIEPRNMSNIDAEPLPIICEQQDEIIGSSGNRSSATFDTLSFVADDESVPVNIDFSTQSNKTTSDPEVFLEEDDPSVSTKGNLDLNNMPQVSDKSSFEEQNFSEDDLLTKSKVSSINTFVDGQVKNDDNEVNKSRSESSNPGAFYSAPGIPAPSVVSAAVEVFPGKVLVPAVVDQGQGQALAALQALNVIESDVEPSDLCTRREYARWLVSASSALSRKTISKVFPAMYIENVTELAFDDITSEDPDFSSIQGLAEAGLIESRLSRSLAVIVIPFSLICISRSPLSRQDLVSWKMVLEKRQLPEADGKMLYQLSGFIDAGKIHSDVIPALVADVSAGEHGITALAFGHTRLFQPHKPVTKAQAAVALATGDDFDIANRELARVEAESLADNAVASHSVLVAQVEKDINASFEQKLSIEREKISVVERLARDATCELERLRAEREEDRICFIKERAAIESERVVFSRLRLETEDHLQNIMSDKVKIAHEKERISKLRELAENEEKEIKRVQYELEVERKALSMARAWAEDEAKRVSAYAVGLERARDRWERNGIKAVDDNFLEEQLSVKDTSSRYDDEIILIISQFVSRLKEWISKSGKQAEELRETLIAKAGKSAHEAKRVAGDCIERVEKLTQNFRT 900
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g03027 900 Coils Coil 684 704 - -
Vimu3g03027 900 MobiDBLite consensus disorder prediction 341 359 - -
Vimu3g03027 900 PANTHER GPI-ANCHORED ADHESIN-LIKE PROTEIN 68 900 - -
Vimu3g03027 900 Coils Coil 747 781 - -
Vimu3g03027 900 MobiDBLite consensus disorder prediction 316 364 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g03027 Vimu-Chr3 44178859 44184331 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g03027 - - gmx:100801281 1082.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu3g03027 3 44178859 44184331 Vimu3g03027 3 44178859 44184331 ECH
Vimu8g02114 8 27432657 27443632 Vimu3g03027 3 44178859 44184331 PCT