Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g02109 TTGGAGAGCTTCGCATCGAAACGCCGCCGTATCTTGCACAGGTCAATGCCGTGCTCTTCATCCACTTCCACCATCACCGGCGATAACAGCAGTAACAAGAATAGAGATGGTTCTTCCTCTCTGCGCGAGTTCAAGCTGAACGAATCCACTTTCCTAGCTTCGCTCATGCCTAAGAAGGAGATTGGCGTCGATCGTTTCCTCGACGCTCATCCTGAGTACGACGGTCGCGGCGCTCTCATCGCCATCTTCGGTACTCTTGCGCCGTTGACTTTCGCTCCACTATGCGTTCTTCGTCGATATTCTGGTGTAGACCCAGCTGCTGATGGATTACAGACTACCTCAGATGGGAAGCCAAAAGTTCTCGATGTCATTGATTGCACAGGAAGTGGTGATATTGATACCTCAAAGGTGGTGAAGGCTGATGCTGACGGTCATATTGGTGGGGCTTCAGGGGCATCATTGGTTATCAATACATCATGGAAGAATCCTTCTGGTGAATGGCATGTGGGCTATAAATTGGTTTATGAGTTATTCACGGAAACTTTGACTTCTCGTTTGAAGAAAGAAAGAAAGAAAAAATGGGATGAGAGAAACCAGGAGGAAATTGCCAAGGCTGTAAAACAACTTGCTGACTTTGATCAGAAACACATCAAGGTAGAGGATGTACATCTTAAAAGAGCCCGGGAAGATATCCAGAATAGACTTGATATTCTGAGAAAGCAATCTGAGAGCTATGATGATAGAGGGCCTGTCATAGATGCTGTTGTCTGGCATGATGGAGAGGTTTGGAGGGTTGCCCTTGACACACAGAGTCTGGAGGATGATCCAAATAGTGGAAAACTTGTTGATTTTGTGCCTTTAACTAATTATAGGATAGAGAGGAAGTATGGTGTCTTCAGCAAATTAGATGCTTGTACATTTGTTGTTAATGTCTATAATGATGGGAATGTCTTGAGTATCGTAACAGACAGTTCTCCACATGCCACCCATGTTGCTGGTATAGCTACTGCCTTCCACCCAAAGGAGCCCTTGTTGAATGGAGTTGCACCTGGCGCACAAATAATATCTTGTAAAATTGGGGATTCTCGCTTAGGTTCAATGGAAACAGGAACTGGTTTAACTCGCGCACTGATAGCTGCTGTGGAGCATAAGTGTGACCTTATCAACATGAGTTATGGTGAAGGAACATTACTACCAGACTATGGGCGCTTTGTTGACCTCGTGAATGAAGTGGTGAACAAGCATCGTTTGATATTTGTGAGCAGTGCTGGTAACAGTGGACCAGGATTGAGCACTGTTGGTGCACCTGGTGGTACTTCCTCAAGTATCATAGGTGTTGGTGCGTATGTATCTCCTGCTATGGCTGCTGGTGCTCATTGTGTTGTTGAGCCTCCTTCTGATGGGCTTGAATACACTTGGTCTAGCAGAGGACCAACAGCTGATGGAGACCTTGGTGTTTGTGTGAGTGCTCCGGGTGGTGCTGTTGCTCCTGTTCCCACTTGGACTCTGCAACGGCGTATGCTCATGAATGGGACATCAATGGCATCACCTTCAGCCTGTGGAGGAACTGCATTGGTCATAAGTGCAATGAAGGCTGAGGGAATTCCTGTGAGTCCATACAGTGTGAGGATAGCACTTGAAAATACTGCAGTCCCCATAGGTGATTTACCTGAGGATAAATTATCAACTGGACAAGGGCTTATGCAAGTTGACAAGGCTTTTGAATATATACAGAAGTGTCAAAATGTTCCATGTGTTTGGTATCAAATAAAAATCCAGCAATCTGGAAAAACTAATCCTTCATCAAGGGGCATCTACCTTAGGGAGGCTAGTGCTTGCACGCAATCTACTGAGTGGACAGTGCAAGTTAATCCAAAATTTCATGAAGATGCTGACAACTTAGACGATTTGGTTCCATTTGAGGAGTACATTGAATTGCATTCTACAGAAGAAACAGTTGTGAAGTCCCCTGACTATCTTTTGCTCACTCATAATGGTCGCACCTTCAATGTAGTGGTCGATCCTTCCAATCTTTCTGATGGTCTTCATTATTTTGAGGTCTATGGTATTGATTACAAAGCTCCATGGCGAGGTCCTCTTTTCAGAATTCCAATCACCATAACAAAGCCTAAGGCTGTAACTAACATGCCTCAACAAATTTCTTTTTCAAAGATGTTATTCAAGCCAGGCCATATAGAAAGAAGATACATCGAAGTTCCGCATGGTGCAACTTGGGCTGAAGCAACAATGAAAACATCAGATTTTGACACAGCAAGAAGATTTTATGTGGATGCTGTTCAGCTGTGCCCACTGCAAAGACCTTTGAAATGGGAGGCTTCTGTAACTTTTCCTTCTCCTGCTGCGCAAAGCTTTGCGTTTAGGGTAGTAAGTGGTCAGACATTGGAATTAGTCATTTCTCAGTTTTGGTCAAGTGGCATAGGGAGTCATGAGACTGCGAGTGTGGATTTTGAGGTTGTGTTTCACGGGATAAAAGTCAATCAGGATGTTATACTTGATGGTAGTGATGCACCAGTTAGGATTGACACTGAAACACTACTGGTATCTGAGGAACTTGCACCTGTGGCAATTCTGAACAAGGTTAGGGTACCATATCGACCAGTAGATTCTAAGATTAGTGCACTTTCAACAGATCGTGACAAACTTCCTTCTGGACAGCAGATACTGGCACTGACTTTGACCTACAAGATCAAATTGGAAGATGGAGCTCAAGTAAAACCTCATGTACCATTGTTAAATGACCGGATATATGACACTAAATTTGAGTCCCAATTTTACATGATTTCTGACTCAAACAAGCGCATATATTCAACTGGAGATGTCTATCCAAGTTCTTCAAATCTTCCCAAAGGAGAATATACTCTACAGTTATATTTGAGGCATGACAATGTGCAGATTTTGGAAAAGATGAGGCATTTGGTGTTATTCATAGAGCGAAATTTGGAAGAGAAGGATGTAATTCGGTTAAGCTTTTTCTCTCAACCTGATGGCCCACTGGTGGGAAATGGTTCCTTTAAGTCCTCATCACTAGTTCCAGGTATAAAAGAAGGGCTATATATTGGTCCACCACAAAAAGAAAAGCTTCCCAAGAATTCTCCACCCGGATCTGTATTGCTAGGGACAATTTCATATGGGAAGCTATCATTTGCTGGTCAGGGAGAAAATACAAATCCTGAAAAGCACCCTGCTTCGTATACAATTTCTTACATAATTCCCCCAAATAAGATTGACGAGGACAAGGCAAAAGGTTCTTCCTTATCTTCCAAGAAGAACGTTTCAGAACGCTTAAACGAAGAGGTAAGAGATACTAAAATAAAAGTTCTAGCAAGCTTGAAACAAGAAACTTCTGAAGAGCGCTCGGAGTGGAAAGAGCTATCTGCCTTGCTCAAATCAGAATATCCAAAGTACACTCCATTACTTGCAACCATTTTGGAAGGTCTAGTTTCTAGGAATAATGTCAAAGACAAAATTAATCATGATGAAGAGGTGATTAGTGCTGCCAATGAGGTGATTGACAGTATTGACAGAGAAGAGCTGGCGAAATTTTTTGCACTAAAAAATGATCCTGAAGAGGAAGAAGCAGAGAATATCAGAAAAAAGATGGAGTTAACCCGAGACCAATTGGCAGAGGCACTGTACCAAAAGGGGCTTGCGCTGGCAGAGATTGAGTCTTTAAAGGACGGAGATAAGTCCCCAACAGAAGGGGCAAAAGGAGGCTTGGACAAAAAACAATCTACAGATGATCGCAGAGATAAGTTTGAAGAGAATTTTAAAGAACTGAGGAAATGGGTTGATGTGAAGTCAGCTAAATATGGAATCCTCTTAGTAACACGAGAGAGGCGAGCTCAAAGGCTTGGAACCGCATTGAAGGTACTGTGTGACATAATTCAAGATGATGCAGAGCCTGCCAAAAAGAAATTCTACGATCTGAAACTGTCTTTGCTTGATGAGATTGGATGGACACATTTAGCTACATACGAGAGACAGTGGATGCATGTGCGTTTCCCTCCAAGCTTGCCTCTTTTCTAG 4047 0.4304 MESFASKRRRILHRSMPCSSSTSTITGDNSSNKNRDGSSSLREFKLNESTFLASLMPKKEIGVDRFLDAHPEYDGRGALIAIFGTLAPLTFAPLCVLRRYSGVDPAADGLQTTSDGKPKVLDVIDCTGSGDIDTSKVVKADADGHIGGASGASLVINTSWKNPSGEWHVGYKLVYELFTETLTSRLKKERKKKWDERNQEEIAKAVKQLADFDQKHIKVEDVHLKRAREDIQNRLDILRKQSESYDDRGPVIDAVVWHDGEVWRVALDTQSLEDDPNSGKLVDFVPLTNYRIERKYGVFSKLDACTFVVNVYNDGNVLSIVTDSSPHATHVAGIATAFHPKEPLLNGVAPGAQIISCKIGDSRLGSMETGTGLTRALIAAVEHKCDLINMSYGEGTLLPDYGRFVDLVNEVVNKHRLIFVSSAGNSGPGLSTVGAPGGTSSSIIGVGAYVSPAMAAGAHCVVEPPSDGLEYTWSSRGPTADGDLGVCVSAPGGAVAPVPTWTLQRRMLMNGTSMASPSACGGTALVISAMKAEGIPVSPYSVRIALENTAVPIGDLPEDKLSTGQGLMQVDKAFEYIQKCQNVPCVWYQIKIQQSGKTNPSSRGIYLREASACTQSTEWTVQVNPKFHEDADNLDDLVPFEEYIELHSTEETVVKSPDYLLLTHNGRTFNVVVDPSNLSDGLHYFEVYGIDYKAPWRGPLFRIPITITKPKAVTNMPQQISFSKMLFKPGHIERRYIEVPHGATWAEATMKTSDFDTARRFYVDAVQLCPLQRPLKWEASVTFPSPAAQSFAFRVVSGQTLELVISQFWSSGIGSHETASVDFEVVFHGIKVNQDVILDGSDAPVRIDTETLLVSEELAPVAILNKVRVPYRPVDSKISALSTDRDKLPSGQQILALTLTYKIKLEDGAQVKPHVPLLNDRIYDTKFESQFYMISDSNKRIYSTGDVYPSSSNLPKGEYTLQLYLRHDNVQILEKMRHLVLFIERNLEEKDVIRLSFFSQPDGPLVGNGSFKSSSLVPGIKEGLYIGPPQKEKLPKNSPPGSVLLGTISYGKLSFAGQGENTNPEKHPASYTISYIIPPNKIDEDKAKGSSLSSKKNVSERLNEEVRDTKIKVLASLKQETSEERSEWKELSALLKSEYPKYTPLLATILEGLVSRNNVKDKINHDEEVISAANEVIDSIDREELAKFFALKNDPEEEEAENIRKKMELTRDQLAEALYQKGLALAEIESLKDGDKSPTEGAKGGLDKKQSTDDRRDKFEENFKELRKWVDVKSAKYGILLVTRERRAQRLGTALKVLCDIIQDDAEPAKKKFYDLKLSLLDEIGWTHLATYERQWMHVRFPPSLPLF 1348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g02109 1348 Gene3D - 1096 1348 IPR046939 -
Vimu8g02109 1348 Gene3D - 587 722 IPR046940 -
Vimu8g02109 1348 SUPERFAMILY Subtilisin-like 55 584 IPR036852 GO:0004252|GO:0006508
Vimu8g02109 1348 FunFam Tripeptidyl-peptidase 2 587 718 - -
Vimu8g02109 1348 ProSitePatterns Serine proteases, subtilase family, serine active site. 511 521 IPR023828 -
Vimu8g02109 1348 MobiDBLite consensus disorder prediction 16 39 - -
Vimu8g02109 1348 PRINTS Subtilisin serine protease family (S8) signature 323 336 IPR015500 -
Vimu8g02109 1348 PRINTS Subtilisin serine protease family (S8) signature 510 526 IPR015500 -
Vimu8g02109 1348 ProSiteProfiles Serine proteases, subtilase domain profile. 225 574 - -
Vimu8g02109 1348 Pfam Subtilase family 303 554 IPR000209 GO:0006508|GO:0008236
Vimu8g02109 1348 FunFam Tripeptidyl-peptidase 2 1096 1348 - -
Vimu8g02109 1348 CDD Peptidases_S8_Tripeptidyl_Aminopeptidase_II 55 553 IPR034051 GO:0006508|GO:0008240
Vimu8g02109 1348 Coils Coil 1197 1217 - -
Vimu8g02109 1348 Gene3D - 135 199 - -
Vimu8g02109 1348 Gene3D Peptidase S8/S53 domain 251 585 IPR036852 GO:0004252|GO:0006508
Vimu8g02109 1348 FunFam Tripeptidyl-peptidase 2 homolog 251 584 - -
Vimu8g02109 1348 Coils Coil 228 248 - -
Vimu8g02109 1348 Pfam Tripeptidyl peptidase II 853 1037 IPR022229 -
Vimu8g02109 1348 MobiDBLite consensus disorder prediction 1233 1254 - -
Vimu8g02109 1348 PANTHER PEPTIDASE S8 51 973 - -
Vimu8g02109 1348 FunFam Tripeptidyl-peptidase 2 135 196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g02109 Vimu-Chr8 27346748 27369112 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g02109 K01280 - gmx:100798235 2377.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu8g02109 8 27346748 27369112 Vimu8g02109 8 27346748 27369112 ECH
Vimu8g02109 8 27346748 27369112 Vimu3g03035 3 44226976 44246508 PCT