Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g03035 ATGCATAACCAACACACACTCTTACTCAGACTCCCCTCGTTGTCCTCTTACACTCTCACCACCATTCATCACCCCACAACAAAGACAAAGGTAAGCAGAACGACAAGGAAACGCAATCGCTGTTCCTCCTTCAGAAGAAGCAATTGGGTTGTCCCCAATGCATTGACAATGCATTGTACTTCTCGTAGTGGCAGCGATGATAACAACAACCACAACGGTGCCACTTTCCGCAACTCCAAGCTGAACGAGTCAACCTTCCTGGCTTCTCTCATGCCCAAGACGGAGATTGGCGCTGATCGTTTCCTTCATGCTCACCCACATTACGACGGGCGCGGCGCTCTCATTGCTATCTTCGATTCTGGTGTAGACCCGGCTGCGGCTGGGTTACAGGTGACCTCAGATGGGAAACCAAAAATTGTCGATATTCTTGATTGCACTGGGAGCGGAGACGTTGATACCTCAAAGGTGGTAAAGGCTGATGCGGATGGTTGTATTTTGGGGGCTTCTGGGGCACCTTTGGTCATCAATACAGCCTGGAAAAATCCCTCTGGTGACTGGCATGTGGGTTATAAATTGGTTTATGAGCTTTTTACTGAAAATTTGACTTCTCGTTTGAAGAGAGAAAGAAAGAAAAAATGGGATGAGAAAAACCAGGAGGAAATTGCAAAGGCTGTAAAGCAGCTTACCGATTTTGATCAGGAACACGTGAAGGTGGAGGAAGCTAATCTTAAAAGGGTTCGTGAAGACATTCAGAATAAACTTGATCTTCTGAGGAAGCAGTCTGAGAGTTATGATGATAAAGGGCCTGCCATAGATGCTGTTGTCTGGTATGATGGAGAGGTTTGGAGAGTTGCAATTGACACACAGAGTCTTGAGGACGATCCAGACTGTGGGAAACTTGCTAATTTTGTACCCTTAACTAATTATAGGACTGAGAAGAAGTATGGTATCTTCAGCAAATTAGATGCTTGTACATATGTTGTGAATGTCTATAGTAATGGAAATGTCTTAAGCATGGTAACAGATAGCTCCCCTCATGGCACCCATGTTGCTGGTATAGCTGCTGCATTCCACCCAGAGGAACCTTTATTGAATGGAGTTGCACCTGGAGCACAATTAATATCTTGTAAAATTGGGGACTCTCGCTTAGGTTCAATGGAAACTGGAACTGGTCTAACTAGGGCTCTGATAGCTGCTGTTGAGCATAAATGTGATCTTATCAATATGAGTTATGGTGAGCCTACTTCACTGCCAGACTATGGACGGTTCGTTGACCTTGTGAATGAAGCAGTAAACAAGCATCGATTGATATTTGTGAGCAGTGCTGGTAATAGTGGGCCAGCATTGAGCACTGTTGGGGCACCTGGTGGTACATCTTCAAATATTATAGGTGTTGGCGCTTATGTTTCTCCTGCAATGGCAGCTGGTGCTCATTCTGTTGTTGCACCTCCTTCCGATGGGCTTGAATACACATGGTCTAGCCGTGGACCAACAACTGATGGAGATCTTGGCGTCTCTGTAAGTGCTCCTGGTTGTGCAGTTGCTCCTGTTCCTACATGGACCCTTCAACGGCGTATGCTCATGAATGGGACATCAATGGCATCACCATCAGCCTGTGGTGGAATTGCATTGCTCATAAGTGCAATGAAGGCTGAGGGGATTCCTGTGAGTCCATATAGTGTGAGGAAGGCCCTTGAAAATACATCTCTTCCCATAGGCGGTTCACCTGAGGATAAGTTGTCCACTGGGCAAGGGCTTATGCAAGTTGACAAGTGTTATGAATATATAAAGCAGTCTCAAAATATTCCAAATGTTCGGTATGAAGTAATGGTCAAGAAATCTGGAAAAACAAATGCTTGGTCACGGGGCATCTACTTGAGGGAGGCTAATGATTGCCGACAACCTATGGAGTGGACGGTGCAAGTTGATCCAAAATTTCATGAAGATGCCAAGAAGCTTGAGGAATTGGCTATGTTTGAGGAGTTCATTGAATTGCAATCATCAGATCAGACGGTTGTGAAAGCCCCCGAGTATCTATTGCTCACTCATAATGGCCGTACCTTCAAGTTATCATCCCTTGCCACCGCCACCTCTTTGTCATCGCTGTTGTGCCCCCTTGCCACCGCTGCCCCTTGCCTCACTGTACCCTTGTCTATGTGTGGTGTCATAGATGAACTTAAGGAAGAAAGTGCTTTGGATTACATAGTTCGCATAATTGTGGATCCTACCAATTTAAATGACGGTCTGCATTACTATGAGCTTTATGGTATTGACTACAAAGCACCATGGCGTGGTCCTATTTTCAGAATTCCAATTACTGTAACCAAGCCCATGGCTGTAACTGACAGATATCCTCTAGTTTCATTTTCAAATATGTTATTCCTGCCAGGCCATGTCGAGAGGAAGTATATAGAAGTGCCAAATGGTGCATCTTGGATTGAAGCAACTATGAATGCATCAAGTTTTGATACAGTTAGAAGATTTTTTGTGCACACAGTTCAGATATGTCCATTGCGAAGACCTTTTGCACGGAGGAATGTGATAACTTTTTCCTCTCCTGCTGCCAAAAGCTTTACCTTTAGGGTAGTAGGTGGTCAGACATTGGAACTAGTAATAGCTCAGTTTTGGTCAAGTGGCATTGGCAGTCATGAGACCACCAGGGTGGATCTTGAGTCATATCCTTCAAGTTCAGCACCTTTTGTAACTAGGCCTTGCATATTGTTGGATGCTTTGAAGAGAAAGGTTATGTTTCATGGTATAAAAGTCAATCAAGAGGAAATTGTACTTGATGGGAGTGAAGCACCAATCAGAATTGATGCTGAAGCGCTATTGGCATCTGAGAAACTTGCACCAGTAGGAATTCTGAATAAGATAAGGGTGCCCTATCGACCAATAGATGCTACAATTAGCTCACTTTCAAGCGATCGTGACAAACTCTCCTCTGGAAAGCAGATACTAGCATTGACGTTAACATACAAGATCAAATTGGAAGATGGAGCTGAAATAAAACCTCAAATACCATTTCTAAATGATCGGATATATGATACTAAATTTGAATCTCAATTTTACATCATTTCCGATTCAAACAAGAAAGTATATTCAATTGGAGATGCCTATCCGAGCTCTACAAAACTTCCCAAGGGAGAATACAATTTACAACTGTATTTAAGGTACAACTCTTTCTTAACCATGCATGACAATGTGCAGATTTTGGAAAAGATGAAGCAGCTGGTGTTATTCATCCAGCGGAATTTAGAAGAGAAGGAGATCATTCGCTTATGCTTTTTCTCTGAACCTGATGGTCCAGTGATGGGAGATAGTTCCTTTAAGTCCTCAACATTAGTTCCAGGTATAAAAGAAGGATTTTATCTTGGTCCTCCACCAAAAGACAAACTTCCCAAGAACTGTCTACAAGGATCTGTGTTGGTGGGATCAATATCATATGGTAAACTATCATTTGCTGGTCTACAGGATGGTAAAAGTCCAGAAAAGCATCCTGTGTCACATCGGGTTTCTTATATCATTCCCCCAAATAAGGTTGACGAACACAAGGGAAAAAGTTCTTCCTTATCTTCCAAAAAGACAGTTTCCGAACGCTTAGAACAAGAGGTATGCAATTATTTGGCCGAACAGCTTCTTTGTTTTTTATCCCATCCGATATTTCACTTTTATATTTATTTTTGCTCAATAAAAACATGGACTGAATATCCAAAGCACACACCGTTGCTTGCAAAGATTTTAGAAGGTTTAGTTTCCAGAAGTTATATCAAAGACAAAGTTCTTCATCATGAAGAGATAATTGATGCAGCAAATGAGGTTATTGACAGTGTTGATAAAGAAGAGTTAGCAAAATTTTTTGCACTAAAACATGATCCAGGAGATGAGGAAGTAGAGAAAACCAAGAAAGAGATGGACTTAGCCCGTGATCAGTTGGCAGAAGCACTTTACCAAAAGGGGCTTGCACTGGCAGAGATTGCGTCTTTGAAGGAGGTAGATAAGTCCTTGGCTTTGGTTGCCAGAGAAGGTGCAAAACAAGATGTGGAGAAAACTGATGAGCAATCAAAGGATGATGAGGCTCATCCAGACTTGTTCAAAGAGAACTTCAATGAACTGAAGAAATTGGTTGATGTCAAGTGCAGAAAATATGGAATCCTGTTGGTCACAAACGAGAGGCGTAATCAAAGGCTTGGGACAGCATTGAAGGTACTGAATGACATCATTGAAGATGATGCCGAGCCTGCCCCAAAGAAATTCTATGAACTAAAGCTCTCTTTGCTTGAGGAAATTGGATGGACTCATTTTTGTTCATATGAGAGTGAATGGATGCTTGTGCGTTTCCCCCCAAGCTTGCCCCTTTTCTAG 4362 0.4266 MHNQHTLLLRLPSLSSYTLTTIHHPTTKTKVSRTTRKRNRCSSFRRSNWVVPNALTMHCTSRSGSDDNNNHNGATFRNSKLNESTFLASLMPKTEIGADRFLHAHPHYDGRGALIAIFDSGVDPAAAGLQVTSDGKPKIVDILDCTGSGDVDTSKVVKADADGCILGASGAPLVINTAWKNPSGDWHVGYKLVYELFTENLTSRLKRERKKKWDEKNQEEIAKAVKQLTDFDQEHVKVEEANLKRVREDIQNKLDLLRKQSESYDDKGPAIDAVVWYDGEVWRVAIDTQSLEDDPDCGKLANFVPLTNYRTEKKYGIFSKLDACTYVVNVYSNGNVLSMVTDSSPHGTHVAGIAAAFHPEEPLLNGVAPGAQLISCKIGDSRLGSMETGTGLTRALIAAVEHKCDLINMSYGEPTSLPDYGRFVDLVNEAVNKHRLIFVSSAGNSGPALSTVGAPGGTSSNIIGVGAYVSPAMAAGAHSVVAPPSDGLEYTWSSRGPTTDGDLGVSVSAPGCAVAPVPTWTLQRRMLMNGTSMASPSACGGIALLISAMKAEGIPVSPYSVRKALENTSLPIGGSPEDKLSTGQGLMQVDKCYEYIKQSQNIPNVRYEVMVKKSGKTNAWSRGIYLREANDCRQPMEWTVQVDPKFHEDAKKLEELAMFEEFIELQSSDQTVVKAPEYLLLTHNGRTFKLSSLATATSLSSLLCPLATAAPCLTVPLSMCGVIDELKEESALDYIVRIIVDPTNLNDGLHYYELYGIDYKAPWRGPIFRIPITVTKPMAVTDRYPLVSFSNMLFLPGHVERKYIEVPNGASWIEATMNASSFDTVRRFFVHTVQICPLRRPFARRNVITFSSPAAKSFTFRVVGGQTLELVIAQFWSSGIGSHETTRVDLESYPSSSAPFVTRPCILLDALKRKVMFHGIKVNQEEIVLDGSEAPIRIDAEALLASEKLAPVGILNKIRVPYRPIDATISSLSSDRDKLSSGKQILALTLTYKIKLEDGAEIKPQIPFLNDRIYDTKFESQFYIISDSNKKVYSIGDAYPSSTKLPKGEYNLQLYLRYNSFLTMHDNVQILEKMKQLVLFIQRNLEEKEIIRLCFFSEPDGPVMGDSSFKSSTLVPGIKEGFYLGPPPKDKLPKNCLQGSVLVGSISYGKLSFAGLQDGKSPEKHPVSHRVSYIIPPNKVDEHKGKSSSLSSKKTVSERLEQEVCNYLAEQLLCFLSHPIFHFYIYFCSIKTWTEYPKHTPLLAKILEGLVSRSYIKDKVLHHEEIIDAANEVIDSVDKEELAKFFALKHDPGDEEVEKTKKEMDLARDQLAEALYQKGLALAEIASLKEVDKSLALVAREGAKQDVEKTDEQSKDDEAHPDLFKENFNELKKLVDVKCRKYGILLVTNERRNQRLGTALKVLNDIIEDDAEPAPKKFYELKLSLLEEIGWTHFCSYESEWMLVRFPPSLPLF 1453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g03035 1453 Gene3D - 605 701 IPR046940 -
Vimu3g03035 1453 Gene3D - 733 787 IPR046940 -
Vimu3g03035 1453 CDD Peptidases_S8_Tripeptidyl_Aminopeptidase_II 90 572 IPR034051 GO:0006508|GO:0008240
Vimu3g03035 1453 Gene3D Peptidase S8/S53 domain 271 604 IPR036852 GO:0004252|GO:0006508
Vimu3g03035 1453 Gene3D - 154 220 - -
Vimu3g03035 1453 Gene3D - 1228 1453 IPR046939 -
Vimu3g03035 1453 Pfam Subtilase family 110 583 IPR000209 GO:0006508|GO:0008236
Vimu3g03035 1453 PANTHER PEPTIDASE S8 88 1036 - -
Vimu3g03035 1453 Coils Coil 1297 1317 - -
Vimu3g03035 1453 FunFam Tripeptidyl-peptidase 2 homolog 270 603 - -
Vimu3g03035 1453 PRINTS Subtilisin serine protease family (S8) signature 342 355 IPR015500 -
Vimu3g03035 1453 PRINTS Subtilisin serine protease family (S8) signature 110 129 IPR015500 -
Vimu3g03035 1453 PRINTS Subtilisin serine protease family (S8) signature 529 545 IPR015500 -
Vimu3g03035 1453 FunFam tripeptidyl-peptidase 2 isoform X1 93 178 - -
Vimu3g03035 1453 ProSiteProfiles Serine proteases, subtilase domain profile. 95 593 - -
Vimu3g03035 1453 Pfam Tripeptidyl peptidase II 944 1136 IPR022229 -
Vimu3g03035 1453 ProSitePatterns Serine proteases, subtilase family, serine active site. 530 540 IPR023828 -
Vimu3g03035 1453 Coils Coil 240 267 - -
Vimu3g03035 1453 ProSitePatterns Serine proteases, subtilase family, histidine active site. 346 356 IPR022398 -
Vimu3g03035 1453 FunFam Tripeptidyl-peptidase 2 154 215 - -
Vimu3g03035 1453 SUPERFAMILY Subtilisin-like 92 603 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g03035 Vimu-Chr3 44226976 44246508 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g03035 K01280 - gmx:100787184 2282.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu3g03035 3 44226976 44246508 Vimu3g03035 3 44226976 44246508 ECH
Vimu8g02109 8 27346748 27369112 Vimu3g03035 3 44226976 44246508 PCT