Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g02104 ATGGCCATTAACATTAGCTTGAGATGTTTGGCAATGGTTGCCATTGCATTTTTCTTCACCGTGCAAGGAACTCTTGGGAAGATAGAATGCGAGCGTTTGAGCGAGGACACGTGTGCATTTGCGGTGTCGTGGGAGGGAAAACGGTGCGTGCTGGAGAAGCGTGTGAAGAGGAGCGGGGAAGAGGCTTACACGTGCCGGACTTCAGAGATTAAAACGGAAATACAGAACGGACAGATTGAAACGGAGGACTGCATAAAGGGTTGTGGTTTGAACAGAAAATCGTTTGGAATCTCTTCGGATTCTCTTCTTGAAATTGGGTTCACCAAAAACCTATGCTCCCCTCACTGCTACCAAAACTGTCCCAACATTGTTGACCTATATTTCAACCTTGCTGCTGGTGAAGGTGTGTTTCTTCCCGGATTGTGTGCATCAGAAGGTGGAAATGGTCGTCGACAAACGGCTGAGATCAGAAGCTCTGGTTTGGTAGCATCAGGACCACGGAGCTCTCTGCAATCGACTGCAACTTCTCTACAACCACCCGCAGTTGCTCCATTCCCACAAGTCTAA 567 0.4832 MAINISLRCLAMVAIAFFFTVQGTLGKIECERLSEDTCAFAVSWEGKRCVLEKRVKRSGEEAYTCRTSEIKTEIQNGQIETEDCIKGCGLNRKSFGISSDSLLEIGFTKNLCSPHCYQNCPNIVDLYFNLAAGEGVFLPGLCASEGGNGRRQTAEIRSSGLVASGPRSSLQSTATSLQPPAVAPFPQV 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g02104 188 MobiDBLite consensus disorder prediction 163 188 - -
Vimu8g02104 188 Pfam PAR1 protein 28 184 IPR009489 -
Vimu8g02104 188 MobiDBLite consensus disorder prediction 163 182 - -
Vimu8g02104 188 PANTHER PAR1 PROTEIN 11 184 IPR009489 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g02104 Vimu-Chr8 27207991 27209537 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g02104 - - gmx:100778782 278.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu8g02104 8 27207991 27209537 Vimu8g02104 8 27207991 27209537 ECH
Vimu8g02104 8 27207991 27209537 Vimu3g03045 3 44334344 44335615 PCT