Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g03045 ATGGCCTCTAACTTCACCTTCACGACTTTCACCATATTTGCCCTTGCATTTTCTCTCACCCTGCAAGCCACTCTTGGTGAGATAGAATGCGAGAATCTGAGCCAGGAGACGTGCTCGTTCGCCGTGTCATCCGCTGGGAAACGGTGTGTGCTGGAGAAGCGCGTGAAGAGGAGTGGTGAGGAGGCATACACATGCAAAACATCAGAGATTGAAGCTGAGAATGTGAAGGATCACATGGAAACAGAGCAATGCATAAAGGCTTGTGGATTGGACAGAAAATCCCTTGGAATCTCATCAGATTCTCTTCTCGAGTCTACCTTCACACACAAGCTCTGTTCCCCTCACTGCTACCAAAGCTGCCCCAACGTTGTTGACTTATACTTCAATCTTGCAGCTGGTGAAGGTGTGTTTCTTCCCAAGTTGTGTGAGGTACAAGGTGTGAATGCTCGTCGAGGAATGGCTGAACTCAGAAGCTCTGGCATTGTGGCACCAGGACCTGTGCACTCTCTGCACTTCGGTAATATTGAACCCACGGTTTCCCCATCACCAAACTAA 555 0.4901 MASNFTFTTFTIFALAFSLTLQATLGEIECENLSQETCSFAVSSAGKRCVLEKRVKRSGEEAYTCKTSEIEAENVKDHMETEQCIKACGLDRKSLGISSDSLLESTFTHKLCSPHCYQSCPNVVDLYFNLAAGEGVFLPKLCEVQGVNARRGMAELRSSGIVAPGPVHSLHFGNIEPTVSPSPN 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g03045 184 PANTHER PAR1 PROTEIN 8 181 IPR009489 -
Vimu3g03045 184 Pfam PAR1 protein 28 183 IPR009489 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g03045 Vimu-Chr3 44334344 44335615 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g03045 - - gmx:100787709 300.441
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu3g03045 3 44334344 44335615 Vimu3g03045 3 44334344 44335615 ECH
Vimu8g02104 8 27207991 27209537 Vimu3g03045 3 44334344 44335615 PCT