Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g02101 ATGTCAAGCTTTGGTGTGTGCAGAGAGACAGTGTGCATTGGAAGTGAGAGAGAGACACTGTTGAAGTTGAAGGATCATCTCATTGATCCTTCAAATAGACTTTCTTCTTGTAATGCTTCTCTCAATCCCAATTGTTGCCATTGGTATGGAGTTCTCTGCAACAACATCACGTCTCATGTTGCAGAGCTTCACCTCACCACTCCACCTCCTCTTTATGATGCTGATGTTTATGAAGAGAGCCTACTTGAAGAAGCATACAAAGAGTATAGTAGAAGGGCATTCAGTGGAGAGATAAATCCTTGTTTGGTTGATTTGAAGCATTTGAATTACTTGGATTTGAGCTACAATCTTTTTTATGATGTACCAATTCCTTCTTTCATTGCTACAATGACTTCCTTAACTCACCTCAACCTTTCTTATGCTGGATTCATGGGGAACATTCCTCCTCAGATTGGAAATCTCTCCAATTTGCTTTATCTTGATTTAAGTTATGCTACCAACGGAACAATTCCTTCCCAGATAGGGAATCTCTCCAATTTGTTGTACCTTGACCTCTCTTATGCTTTCAACGGTAGAATTCCTCCTCAGATAGGGAATCTCTCCAACTTGCTCCACCTGGACCTCCGAGGAAGATATTATGATGAAGAATCTCTATTTTATGAAAATGTTGATTGGCTGTCAAGTCTTTCCAAGCTTTCTTATCTTGACTTGAGCAACACTTGGTCACTTGGAGGAGGTATGCCAATTCCTTCTTTTCTTGGCTCAATGACCAACTTAATTCATTTGGACCTCTTTGATTCTGGATTTATGGGCAACATTCCTCCCCAGATTGGTAATCTTTCCAATTTGGCTTATCTAGATTTAAGTTATGCTGCCAATGGAATTATTCCCTCTGAAATTGGAAATCTCTCCAACTTGCTTTATCTTCATCTTGGAGGTGATTATTTTGTTGGAAATGATGACTGGTTGTCAAGTCTTTCAAAACTTGAATATCTTGATTTAGGATATGCAAACCTATCCCAATCATTTGATTTTCCTTCAATTGTGCAAGCTCTTCCTTCTTTGATGCACCTACAATTGTCAAGATGTACACTCCCTCCGTATAATCAGCCATCTTTTCTTAATATCTCGTCTCTCGTCACTCTTGATCTTTCCTTTACTTCTCATTTTTCTACAATTTCTTTTGTTCCAAAGTGGATATTTGGACTACAAAAACTGGTTTCTCTTTTCTTAGATGGGAACTACTTTAAAGGTCCAATTCCCGATGGTCTTCGAAACCTCACACTACTTGAAAATCTTGATTTGCAAGAAAATTCATTCTCATATATACCTGATTGGTTTTATAGTAGTTTCCTTAATCTAAAGATCTTGGACCTATCTAGAAACAACTTACAGGGGACTATTTCTGATGCCTTAGGAAATATGACTTCTCTGGTTGCATTTGATCTCTCTTCCAATAAACTTGAAGGTCCAATTCCAACTTCTTTTGGTTATCTATGCAACTTAAGGGTGATAAGTTTATCATATCTCAAACTCAACCAACATATTAAAGAAATTTTAGATATTCTTTCTCCTTGTATTTTCCATGGATTGACAACACTTCAATTTGAAAGTTCTCAACTTTCAGGAAATCTTCCAGTATCACTTGGAAAACTTTCATCACTAAGAACTCTTTCTTTGTCCAAGAATCAACTTAGCGGAAACCTTCCAGTATCAATTGGAAAACTTTCATCAGTAAGCACTCTTTCTCTGTACAAGAATCAACTTAGTGGAAATCCATTTGAAAGTCTTAGATCACTCTCTAAATTGTCATATCTTGATATTGGTTATAATCGTTTTGAAGGAGTTGTGATGGAAAATCATCTCATTAATCTTGTGAGTTTGAGTATCCTTCATGCATCAGAAAACAATTTGACTTTAAAAGTGGGTCCCAATTGGCATCCTACTTTTCAGCTTACTTCTTTGGATATGAGCTCTTGGAAATTAGGTCCTAACTTTCCTTCATGGATTCAATCACAAAACAAACTTGATTATCTAGCGATGCCTAACACGGGAATTTTAGATTCTATTCCCTATTGGTTTTGGAAAACATTTTCTCAGACTTCTTTTTTAGATCTCTCTCATAATCATATCCATGGTGAGCTTGGGACTACATTAAAGAATCCAATATCTATCCCCGCTGTTGATCTAAGCGCAAATAACTTACGTGGCAAATTACCCTTACTTTCAAATCGTGTGGGGTTTTTGGACCTTTCAAGCAATTCATTCTCCAAATCCATGGATGATTTTTTATGCAAAAATCAAGAGAAGCCAATGAATTTAGAATTTCTCAATCTTGCATCGAATAACTTATCAGGAGAAATGCCTGATTGTTGGTACATTTGGCCATATCTAGTGGACTTGAATTTACAAAACAATAATTTTGTTGGGAACATTCCCCAATCCATGGGTTCATTGACGGAGCTCCAATCTTTACAAATCCGTAAAAACTTGCTCTCGGGAACATTTCCAACAATTTTGAGGAAGACCAAACAATTGATTTTATTAGATATTGGAGAAAATAATTTTTCAGGAACAATTCCAGATTGGGTTGGAGAAAGTTTTATAGATATGAAGGTTCTTATCCTTCGATCAAATAGATTTTTCGGTCATATTCCTATTAAAATATGTGATATGAGTCTTCTTCAAGTGTTAGACCTTGCACAAAATAACTTGACTGAAAATGTACCTACTTGTTTTAACAGCTTGAAGGCCATGACACAAATGAACAAAAGTACATATCCTCTTATCTATTGTTTTCCTATGAATGGTAAATCTATACTTATAATGGAAACTGTAGTGAGCGTTCTTCTTTGGTTGAAAGGAAGAGGAGATGAATACAAAAGCTTTCTCGGGTTGGTAACAAGCATTGATTTGTCAAATAACAAATTAGTTGGAGAAATACCGAGAGAGATCACAGATTTAAATGGTTTGTTATATTTGAACTTGTCTCACAACCAACTTATTGGTCACATTCCACAAAGCATGGGTAATATGGAATCATTGTTGTCCATTGATTTCTCAAGGAATAAGCTGTCTGGTGAAATCCCTCCAACCATTTCAAATTTGAGCTTTCTAAGCATGTTAGACTTGTCTTATAATAATTTGAATGGAAAAATTCCAACAGGAACTCAGCTGCAAACCTTCGATGCCTCCAACTTTATTGGCAACAATCTTTGTGGCCCACCACTACCCATCAATTGCAGCTCCAGTGACAAAAGTTATGATCACAATGGCGAAGGGAGTGATAAGCATGGAGTGAAGTTATTTTTTGTGGGCATGACATTTGGATTTGTGGTGGGATTTTGGATAGTAGTTGGTCCTCTGGTCATCTCTAGATCATGGCGTTATGCCTATTTTCATTTCCTTGATCATGTGTGGTTCAAACTTCAATACTTTTTTTAA 3444 0.3644 MSSFGVCRETVCIGSERETLLKLKDHLIDPSNRLSSCNASLNPNCCHWYGVLCNNITSHVAELHLTTPPPLYDADVYEESLLEEAYKEYSRRAFSGEINPCLVDLKHLNYLDLSYNLFYDVPIPSFIATMTSLTHLNLSYAGFMGNIPPQIGNLSNLLYLDLSYATNGTIPSQIGNLSNLLYLDLSYAFNGRIPPQIGNLSNLLHLDLRGRYYDEESLFYENVDWLSSLSKLSYLDLSNTWSLGGGMPIPSFLGSMTNLIHLDLFDSGFMGNIPPQIGNLSNLAYLDLSYAANGIIPSEIGNLSNLLYLHLGGDYFVGNDDWLSSLSKLEYLDLGYANLSQSFDFPSIVQALPSLMHLQLSRCTLPPYNQPSFLNISSLVTLDLSFTSHFSTISFVPKWIFGLQKLVSLFLDGNYFKGPIPDGLRNLTLLENLDLQENSFSYIPDWFYSSFLNLKILDLSRNNLQGTISDALGNMTSLVAFDLSSNKLEGPIPTSFGYLCNLRVISLSYLKLNQHIKEILDILSPCIFHGLTTLQFESSQLSGNLPVSLGKLSSLRTLSLSKNQLSGNLPVSIGKLSSVSTLSLYKNQLSGNPFESLRSLSKLSYLDIGYNRFEGVVMENHLINLVSLSILHASENNLTLKVGPNWHPTFQLTSLDMSSWKLGPNFPSWIQSQNKLDYLAMPNTGILDSIPYWFWKTFSQTSFLDLSHNHIHGELGTTLKNPISIPAVDLSANNLRGKLPLLSNRVGFLDLSSNSFSKSMDDFLCKNQEKPMNLEFLNLASNNLSGEMPDCWYIWPYLVDLNLQNNNFVGNIPQSMGSLTELQSLQIRKNLLSGTFPTILRKTKQLILLDIGENNFSGTIPDWVGESFIDMKVLILRSNRFFGHIPIKICDMSLLQVLDLAQNNLTENVPTCFNSLKAMTQMNKSTYPLIYCFPMNGKSILIMETVVSVLLWLKGRGDEYKSFLGLVTSIDLSNNKLVGEIPREITDLNGLLYLNLSHNQLIGHIPQSMGNMESLLSIDFSRNKLSGEIPPTISNLSFLSMLDLSYNNLNGKIPTGTQLQTFDASNFIGNNLCGPPLPINCSSSDKSYDHNGEGSDKHGVKLFFVGMTFGFVVGFWIVVGPLVISRSWRYAYFHFLDHVWFKLQYFF 1147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g02101 1147 SUPERFAMILY L domain-like 748 1068 - -
Vimu8g02101 1147 Gene3D Ribonuclease Inhibitor 13 187 IPR032675 -
Vimu8g02101 1147 PRINTS Leucine-rich repeat signature 454 467 - -
Vimu8g02101 1147 PRINTS Leucine-rich repeat signature 1036 1049 - -
Vimu8g02101 1147 Gene3D Ribonuclease Inhibitor 446 618 IPR032675 -
Vimu8g02101 1147 PANTHER LRR RECEPTOR-LIKE KINASE 285 443 - -
Vimu8g02101 1147 Gene3D Ribonuclease Inhibitor 246 343 IPR032675 -
Vimu8g02101 1147 Pfam Leucine rich repeat N-terminal domain 15 54 IPR013210 -
Vimu8g02101 1147 SUPERFAMILY L domain-like 44 290 - -
Vimu8g02101 1147 SMART LRR_typ_2 892 915 IPR003591 -
Vimu8g02101 1147 SMART LRR_typ_2 451 475 IPR003591 -
Vimu8g02101 1147 SMART LRR_typ_2 130 154 IPR003591 -
Vimu8g02101 1147 SMART LRR_typ_2 427 450 IPR003591 -
Vimu8g02101 1147 SMART LRR_typ_2 988 1012 IPR003591 -
Vimu8g02101 1147 SMART LRR_typ_2 105 128 IPR003591 -
Vimu8g02101 1147 SMART LRR_typ_2 1036 1059 IPR003591 -
Vimu8g02101 1147 SMART LRR_typ_2 552 576 IPR003591 -
Vimu8g02101 1147 Gene3D Ribonuclease Inhibitor 188 245 IPR032675 -
Vimu8g02101 1147 FunFam Leucine-rich repeat receptor-like protein kinase TDR 772 1083 - -
Vimu8g02101 1147 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 391 647 - -
Vimu8g02101 1147 Gene3D Ribonuclease Inhibitor 344 445 IPR032675 -
Vimu8g02101 1147 SUPERFAMILY L domain-like 223 631 - -
Vimu8g02101 1147 Pfam Leucine rich repeat 430 488 IPR001611 GO:0005515
Vimu8g02101 1147 Gene3D Ribonuclease Inhibitor 619 1085 IPR032675 -
Vimu8g02101 1147 SUPERFAMILY L domain-like 621 765 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g02101 Vimu-Chr8 27151493 27154936 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu8g02101 1 892 Receptor kinase-like Gene Family AT2G15080 28.961 2.64e-56 210
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g02101 - - vun:114180873 1516.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu3g03061 3 44437133 44440604 Vimu8g02101 8 27151493 27154936 PCT