Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g02045 ATGTTTAAGTCATGGAACAAGAAAAACAAGACTAAAGCTGTATTCAAACTACAATTTCAGGCAACTCAGGTGCCAAAGATGAAAAAGCCTGCACTGAAGGTAGCTTTGGTGCCAGATAATGTTGGGAAGCCTACGGTGAAACTAGAGAAAGTTGCTGTCCAGGATGGAACCTGTTCATGGGAGAATCCGATTTTTGAATCAGTAAAATTTGTTAGGGACGCAAAATCAGGAAAACTTCAAGAGAAAATCTACCATTTTGTTGTTTCAACCGGATCTTCAAAATCTGGCTTTCTTGGAGAATCCTCCATTGACTTTGCTGATTTTGCTGCAGAAACTGAGCCACTGACAGTGACAATTCAGAACGTGGAAGGGGTACAAAGAGATCAAAGTACTTTCAGAGATGGGGAAGATTATGGAAATGGAAGCTCAAGACACCTACTGAGCATTTGCAGTGCAGATGAAAATTCTCGTAATGTTTATGAAGATTTCCCCAAGCTATTACCACCCTTGAGGCAAAATTCAATGCCGTGCAAAGGAACTATCGAGGCCATTGCAACAAGAGCTCAAATGCATAGGGGGTCACTGGGTTCAGCATCAGATAGGAGTTTAGGCGACTCCTGGAGAAACAGCCTGGAAGATACTCATCCTCAAGAAAGATTACAAGAGCCTTCAGATAATGTCATTGAAAACCTCAGAAGTGAAATTGCTTCTCTGAAGAGGAAAGCCGAAGAATCAGAACTAGAGTTACAATCGCTTCAGAAGCTGATGGAGAAGGAATGCAGCCGAGGACAAAGTATGTCAAGGCAAATAATCAGCCTCAGAGACGAGAGAAATATGATCAAAACTAAATATGAGCAACTATTGTCGCAGCAAAATCTCATTAGCGAGACCAAAAATTCAAAAGCCTTACAGACTGAGATTGAACAAGCGAGGCAGCAGTTAGAAGCCATAAAAGAAGAGCTTGCTTATGAAAAAGAGTTTAGTTATAATCTTAAATTGCAACTTCAGAAGACACAAAACTCAAACTCCGAACTACTTTTAGCAGTTAGAGAACTTGAAGCAATGCTGGAACATAAGAATAAGGAATTGTTGGACGATACTAAAGAGCATGATGATGCCACAGAATTAGGTCACTTGAAGCAGAAATTTGCAGAACTGAATGGTGAAATAGACATTTGTTATAAGCAACGTGATGAGCTAAATGAGCAAATAAAAGAGCTCAACTTTGAGTGTGAGCATCTGAAGAAAGAAAACCTGGATATCTCTTTGAGATTAAACCATAAAGAAGAACAACAAATTGCGTTACAAAATAAATATTCAGCTTCTTTGGCATCTATAAAACAACTTGAATCTCAAGTACAGAGATTAGAAGAAAAGATAGGGAAGCAGCTGGATGATTTTTCAGGGTCTTTGATTTACATCAATGAACTTGAAAATCAAGTCAGTGATTTGAAGAGAGAAACGAAAATACAAGAAGAGGATTATCAAACAGATTTCCAAGCCATGAAATGTGCAAAACTTGAACAGGAAGAACGGGCCATCCAAGCAGAGGAGACATTGATAAAGACTAGACACAGCAATGATCTCGCATGTCAGCGTTTTCAGGATGAATATCGAATTCTTTCAGCTGAAATGACATTGAAAGTAGAAGAAAACGAAAAGAAGGTCCTGGAAGCTTATGCCGAAGCTGATGAATTGCAGAAGCAGAACAAACTCATGGAAGAAATTCTCCAGAAATGTAATGAAGAGCTCAGGCTTGTTACAAATCAGAATGAATTGAAACTTCAACAGCTCTTGAACCAAATAGATTCAAAAGAAAAGAAAGTGGAAATGATGTCTCAAGAACTAGAGATTAAGTCCAAGCAACTTGAAGATGTCCAAAGGAAAAGGGATGAAAAGGATAAGGCATTAACAAAGCAAATTCAATTGCTCAGAATTGAAATTAGAAAACTGATGCTAGAAGAGCATGCATTATCTAAAGCTGATCCAACAGAGCTCATGACTAGGATGTTAATGCAAGAGAACAATGATGAGGAGATAAGGTTTGACAACCTAACGTCAGCATTAGAAATCTTTAAGACCCAGCACAACGAATTAAAACGTAACTTGCACGTGGAACAAACAGAGAAAGAAAATATGAAGGAAAAAATATCTCAGTTAGAAGGAGAGCTGAAGAAGAAGGTAGAAGAACTAAGTACTGTAGAAAAGAGGCTCAAAAATAGCAAAGGAGCGACGGTCAAAAGTATGAATTGGGCTTCATGGAACTACGAGAGTGCTGCGTCTTGTTCATCCACTAAGGAACACGATAAGTCAAGATCGGAAATGCAGATGGGAATGGATGATGCAAACACCCCTGTTCGAAAGTGTGAAAAAGGAAGAACCATATGCAATTCAGCTGAGAACGAAGTTCATCTAGCTTCACACAGAAGTGAAGTGAAAACTTGCTTGGAAAATAAGGCTATTGTCTTCAATTATAATGATGCTGGTGATTGTCCTACAAATGAGTTGTTGGATGAAGTGGCAGTACTAAAGGAAAGGAACAAATATATGGAAATTCAGCTGAAAGAAATGGAAGAAAGATATTCTGATATTAGTCTTAAGTTCGCAGAGGTGGAGGGAGAAAGACAACAACTTGTTATGGCCCTACGGAATATGAGGAATGGTAAGAACTAG 2673 0.3868 MFKSWNKKNKTKAVFKLQFQATQVPKMKKPALKVALVPDNVGKPTVKLEKVAVQDGTCSWENPIFESVKFVRDAKSGKLQEKIYHFVVSTGSSKSGFLGESSIDFADFAAETEPLTVTIQNVEGVQRDQSTFRDGEDYGNGSSRHLLSICSADENSRNVYEDFPKLLPPLRQNSMPCKGTIEAIATRAQMHRGSLGSASDRSLGDSWRNSLEDTHPQERLQEPSDNVIENLRSEIASLKRKAEESELELQSLQKLMEKECSRGQSMSRQIISLRDERNMIKTKYEQLLSQQNLISETKNSKALQTEIEQARQQLEAIKEELAYEKEFSYNLKLQLQKTQNSNSELLLAVRELEAMLEHKNKELLDDTKEHDDATELGHLKQKFAELNGEIDICYKQRDELNEQIKELNFECEHLKKENLDISLRLNHKEEQQIALQNKYSASLASIKQLESQVQRLEEKIGKQLDDFSGSLIYINELENQVSDLKRETKIQEEDYQTDFQAMKCAKLEQEERAIQAEETLIKTRHSNDLACQRFQDEYRILSAEMTLKVEENEKKVLEAYAEADELQKQNKLMEEILQKCNEELRLVTNQNELKLQQLLNQIDSKEKKVEMMSQELEIKSKQLEDVQRKRDEKDKALTKQIQLLRIEIRKLMLEEHALSKADPTELMTRMLMQENNDEEIRFDNLTSALEIFKTQHNELKRNLHVEQTEKENMKEKISQLEGELKKKVEELSTVEKRLKNSKGATVKSMNWASWNYESAASCSSTKEHDKSRSEMQMGMDDANTPVRKCEKGRTICNSAENEVHLASHRSEVKTCLENKAIVFNYNDAGDCPTNELLDEVAVLKERNKYMEIQLKEMEERYSDISLKFAEVEGERQQLVMALRNMRNGKN 890
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g02045 890 Coils Coil 293 327 - -
Vimu8g02045 890 Coils Coil 840 874 - -
Vimu8g02045 890 MobiDBLite consensus disorder prediction 206 222 - -
Vimu8g02045 890 Coils Coil 549 636 - -
Vimu8g02045 890 Coils Coil 474 494 - -
Vimu8g02045 890 PANTHER MYOSIN HEAVY CHAIN-RELATED PROTEIN 831 889 - -
Vimu8g02045 890 Coils Coil 682 737 - -
Vimu8g02045 890 Pfam N-terminal C2 in EEIG1 and EHBP1 proteins 7 118 IPR019448 -
Vimu8g02045 890 ProSiteProfiles C2 NT-type domain profile. 3 153 IPR019448 -
Vimu8g02045 890 Coils Coil 335 369 - -
Vimu8g02045 890 Coils Coil 439 466 - -
Vimu8g02045 890 Coils Coil 228 262 - -
Vimu8g02045 890 Coils Coil 383 417 - -
Vimu8g02045 890 MobiDBLite consensus disorder prediction 191 222 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g02045 Vimu-Chr8 26441089 26445788 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g02045 - - pvu:PHAVU_004G116900g 1389.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu8g02045 8 26441089 26445788 Vimu3g03070 3 44517012 44521716 PCT