Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g03070 ATGTTCAAGTCATGGAGCAAGAAGAACAAGATCAAAGCTGTGTTCAAATTGGAATTTCAGGCAACTCAGGTGCCAAAGATGAAAAAAAATGCAATAATGGTATCTTTGGTGCCAGATGATGTTGGTAAGACAACGGTGAAACTAGAAAAAACTGCAGCGCAAGACGGGACCTGCTCGTGGGAGAATCCAATTTTTGAATCCGTTAAACTTGTTAGGGATGCAAAATCAGGCAAAATTCATGAGAAAATCTACCATTTCATTGTTTCAACCGGATCTTCAAAATCTGGCTTTCTTGGAGAGGCCTCAATTGATTTTGCTGATTTTGTTGCAGAAATTGAGCCAATCACAATTTCTCTACCCCTAAAGTTTGCCAATTCAGGCATAGTTTTACACGTGACTATTCAGAACGTGGAAGGATATGCTGCTGAAAGAAATGGGGAAGATAATGGGGCTGAGGAACTTGGCAGTGATAGAAGCTTGAAACACCAGCTGAGCTATGGCAGTACAGACCATGAAAGTTATAATGTTGAAAACGAACACATGGCGAGGACCAGATCTGAGTATTCTGAACAAGATGCATCTAATGGCATTAGTCCTGTGCTAGCTTCATGGGAGGATCCTCATAGCTTCAGACAAAATTCAATTCCATCAAAGGGAACTGTTAAAGCCATTGCAACAGAAGCCCAGGTGCATAAGAGGTCAAACACGAACTGGTCAATGGGTTCGGCATCAGATGGAAGTTTAGGTGACTGGACTAACAGCCTAGAAGACAATCCTCCAAGAGAAAGATTACAAGAGCCTTCAAATATTTCCAATGAAAGCCTCAAGAATGAAATTACTTCTTTGAAGAGGCAAGCGGAAGTGTCAGAAATAGAGTTACAATCACTTCGAAAGCAGATAGAAAAAGAAAGCAGTAGGGGACAAAATTTGTCAAGACAAATAATCAGCCTCAGAGAGGAGAGAGATTTGCTCAAAACCAAATACGAGCAACTCAAGTCCCAGCAGAACTTCAATAATGAGTCCAAAACCTCCAAAACCTCCAAAACCTTGAAGTCTGAGATTGAAGATACTAGACTTCAGTTAGAGGCAATGAAGGAAGAGCTTGTTTATGAAAAGGAATTGAGTGCCAATCTTCAATTGCAACTGCGGAAGACACAAAACTCAAACTCTGAATTACTTTTGGCCGTGACAGACCTTGAAGCAATGCTGGAACAAAAGGATAAGGAAATATTGGATCTATCTACGAATATAAAATCCCAGAAGACTACTAAAGAGCGTGAAGAGGGCATAGAATTTGACCTCTTGCGGCTAAAAATTGCAGACCAGGATGAAGAAATAGACAATTACTGTAAACAACGCCAAGAGCTCAGTGAGCAAATTAAAGAACTTACTTTGGAGTATGATCTACTTAAGAAGGAAAATGTGGACATATCTTTGAGATTAAAGCAAGATGAAGCACACCACATCAAGTTACAAAATGAACATTCATCTTCTTTAGTTACAATACAACAACTTGAATCCCAGGTAGAGAGATTAGAAGAGAAGCTAAAGGTGCAGGAAGATGAATTTTCAGCATCTCTGGTCTACATAAAGGAACTTGAAGATGAAGTTAAGTCGTTGGAGAAAGAACTGAAAACACAGGCAGAGAAATTTGAAGAAGATCTCCATGTCATGCAATGTGCAAGAACTGAGCAGGAAGAAAGGGCCCTGCAGGCAGAAGAAGCCTTGAGAAAGACAAGACACAACAATGCTGTTGCGTCCGAGCGTTTTCAGGAGGAATATAGACTGCTTTCTGTTGAAATGGCACAAAAAGTTGAGGAGAATGAAAATATGACTTTGAAAGCAGTTGCAGAGGCTGATGAGTTGCGGCACCAGAACAAACTTATAGAAGAAATGCTCCATAAATGCAATCAAGAGCTCAGGCTTATCACAGATCAGAATGAAGTGAAAATGAAAGAACTATTGGACCAAAGAGACTCAAAAGCAAAAATAATAGAACAGATGTCACAAGAACTAGAAGTTAAGTCTAAACAACTTGAGGATGTGCAAAGGCACTATGATGAAAAGGATGCTTCGTTTTCCAAGCAAATTCAAATGCTCAGATCTCAAATTAAAATGTTGACGGAAGATGGTGTATTGTCTGAAAAAATAAGGGAGGATGCAAAAACAGCTCAGAAAGGACAACCACTTGTGATCTCAAATGACGGGGAGATGATACTTGGCACTCTATTGTCAGAAGTAGAAACCTTTAAGAACCAGCAAATTGAAATAAAACAGAGTTTGCATAAAGAACAAATGGAGAAAGAAAGTATGAAGAAACAAATATCTCAATTAGAAGGAGAGTTGAAGAAGAAGGAAGCGGAGTTAAGTACTATGGAAAAGAAGTTCAAGAATAACAAAGGACGAGCTGCAGTTACACATATGAATTTGACATCAAGAGACAATGAAAGTGTGGTGCCTCCAGCTAAAACACATACCAAGAAGTCAAAATCCGAAATGCATAAGGGAAAGGATGCTTCAAGCAAGTCCGAAGGAGGAACAGTAAACAAGTCAGATGAGAGCAAAGTTTGTCAAGCTTCTGGAAGTGAGGGTGAGTGCCTTACAAATGAATTGTTGAATGAAGTTTCGCTACTAAAGGAAAAGAACAAGATCATGGAGAATGAGCTGAAAGACATGGAGGAAAGATATTCAGAGATTAGTCTGAAATTTGCAGAGGTAGAGGGAGAAAGACAACAGCTTGTTATGGCTGTACGCAATCTCAAGAATGGGAAGAAGAACTAG 2781 0.3952 MFKSWSKKNKIKAVFKLEFQATQVPKMKKNAIMVSLVPDDVGKTTVKLEKTAAQDGTCSWENPIFESVKLVRDAKSGKIHEKIYHFIVSTGSSKSGFLGEASIDFADFVAEIEPITISLPLKFANSGIVLHVTIQNVEGYAAERNGEDNGAEELGSDRSLKHQLSYGSTDHESYNVENEHMARTRSEYSEQDASNGISPVLASWEDPHSFRQNSIPSKGTVKAIATEAQVHKRSNTNWSMGSASDGSLGDWTNSLEDNPPRERLQEPSNISNESLKNEITSLKRQAEVSEIELQSLRKQIEKESSRGQNLSRQIISLREERDLLKTKYEQLKSQQNFNNESKTSKTSKTLKSEIEDTRLQLEAMKEELVYEKELSANLQLQLRKTQNSNSELLLAVTDLEAMLEQKDKEILDLSTNIKSQKTTKEREEGIEFDLLRLKIADQDEEIDNYCKQRQELSEQIKELTLEYDLLKKENVDISLRLKQDEAHHIKLQNEHSSSLVTIQQLESQVERLEEKLKVQEDEFSASLVYIKELEDEVKSLEKELKTQAEKFEEDLHVMQCARTEQEERALQAEEALRKTRHNNAVASERFQEEYRLLSVEMAQKVEENENMTLKAVAEADELRHQNKLIEEMLHKCNQELRLITDQNEVKMKELLDQRDSKAKIIEQMSQELEVKSKQLEDVQRHYDEKDASFSKQIQMLRSQIKMLTEDGVLSEKIREDAKTAQKGQPLVISNDGEMILGTLLSEVETFKNQQIEIKQSLHKEQMEKESMKKQISQLEGELKKKEAELSTMEKKFKNNKGRAAVTHMNLTSRDNESVVPPAKTHTKKSKSEMHKGKDASSKSEGGTVNKSDESKVCQASGSEGECLTNELLNEVSLLKEKNKIMENELKDMEERYSEISLKFAEVEGERQQLVMAVRNLKNGKKN 926
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g03070 926 MobiDBLite consensus disorder prediction 147 201 - -
Vimu3g03070 926 MobiDBLite consensus disorder prediction 232 274 - -
Vimu3g03070 926 Coils Coil 651 685 - -
Vimu3g03070 926 Coils Coil 347 367 - -
Vimu3g03070 926 Coils Coil 389 416 - -
Vimu3g03070 926 MobiDBLite consensus disorder prediction 173 187 - -
Vimu3g03070 926 PANTHER MYOSIN HEAVY CHAIN-RELATED PROTEIN 864 926 - -
Vimu3g03070 926 Pfam N-terminal C2 in EEIG1 and EHBP1 proteins 7 135 IPR019448 -
Vimu3g03070 926 Coils Coil 761 802 - -
Vimu3g03070 926 ProSiteProfiles C2 NT-type domain profile. 3 138 IPR019448 -
Vimu3g03070 926 Coils Coil 530 582 - -
Vimu3g03070 926 Coils Coil 272 334 - -
Vimu3g03070 926 Coils Coil 439 480 - -
Vimu3g03070 926 Coils Coil 619 639 - -
Vimu3g03070 926 MobiDBLite consensus disorder prediction 820 841 - -
Vimu3g03070 926 Coils Coil 868 909 - -
Vimu3g03070 926 MobiDBLite consensus disorder prediction 232 254 - -
Vimu3g03070 926 MobiDBLite consensus disorder prediction 809 853 - -
Vimu3g03070 926 Coils Coil 495 522 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g03070 Vimu-Chr3 44517012 44521716 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g03070 - - vun:114190970 1632.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu3g03070 3 44517012 44521716 Vimu3g03070 3 44517012 44521716 ECH
Vimu8g02045 8 26441089 26445788 Vimu3g03070 3 44517012 44521716 PCT