Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g01999 ATGCTAAAACATGTCTCTGTTGTTTATTCTGGATGCAAATGCAAGACTGATTTGAATAACTGCAGAGACTGTGGATTGCAATCAGCTGCAACCTCCTCCAGTGAAGTTGACGTTTGTGCTGTCTGCCTGGAGAGGTCATGTTCTGTGGCTGCTGAAGGATGTGGACATGAGCTTTGTGTAAGATGTGCACTCTATCTTTGTTCAACGAGCAATGTTTCTTCTGAAACTTGTGGTCCTCCTGGCTCTATCCCTTGCCCTCTTTGCAGACATGGAATTGTCTCTTTTGTGAAGTTACCAGGTTCCCAAGCAAAAGAAAACAAAATGCACGTGTCTCTCAGCCTGTGTACCCCATGCATGCTCCACCCACGTGACCAAGATAACTCTTCTGTTTCTCACACCCCTGAGATTCGAAGGAACCGTGTAGCTTCAGTTCCATCAGAGATGCTTTGCCCTGTCACTTGTACTCCATTTCCTTCTGTAGCTATTCCTCTGTGCACTTGCAATGATGGTCCTTGCCCTACATTTGAATCCCGGGAAGCAGCAACGCGAGACGTACCGGTTCGCCGCTCGCAACCATCCTCGACGATGGATCGGGATAAAATGGAAGGTCCAAGGCTGGATAAGACAACATGTTCAGGCATGTTTTGGGGTAGAAGAAGTTGCAGCAGGGAGCACCAATGCAATTCAGAAATAAATGCTTGA 702 0.4715 MLKHVSVVYSGCKCKTDLNNCRDCGLQSAATSSSEVDVCAVCLERSCSVAAEGCGHELCVRCALYLCSTSNVSSETCGPPGSIPCPLCRHGIVSFVKLPGSQAKENKMHVSLSLCTPCMLHPRDQDNSSVSHTPEIRRNRVASVPSEMLCPVTCTPFPSVAIPLCTCNDGPCPTFESREAATRDVPVRRSQPSSTMDRDKMEGPRLDKTTCSGMFWGRRSCSREHQCNSEINA 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g01999 233 MobiDBLite consensus disorder prediction 179 204 - -
Vimu8g01999 233 SUPERFAMILY RING/U-box 35 95 - -
Vimu8g01999 233 ProSiteProfiles Zinc finger RING-type profile. 39 89 IPR001841 -
Vimu8g01999 233 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 23 110 IPR013083 -
Vimu8g01999 233 ProSitePatterns Zinc finger RING-type signature. 54 63 IPR017907 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g01999 Vimu-Chr8 25878638 25879940 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g01999 K19044 - gmx:100812809 391.734
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu8g01999 8 25878638 25879940 Vimu8g01999 8 25878638 25879940 ECH
Vimu8g01999 8 25878638 25879940 Vimu3g03087 3 44671837 44676133 PCT