Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g01981 ATGGGGGCTGCTGTTTCCACAAGTGCCACAGAAAATGATGAAGTTCCCACCTTTTCTTTGTCCTCCCCACATACGACAACCCTTGATGATGTTCCTGAGAATTGCATCTCTTCTCTCATGATGAGTTTTCATCCACAAGAGATTTGCACATTGGCCAGAGTTAACAAGGCCTTCCACAGAGCTTCTTCTGCTGACTTTGTATGGGAATCAAAGTTGCCTTCTAACTATAAATTCCTTCTCAACAAACTACTTCCTCAACACAACAATCTTTCTTCTTCCATGTCCAAGAAAGAGATCTATGCCAAACTATGCACACCCAATTTCTTCGATCATGGCACCAAGGAGATTTGGCTTGACAGAAGCAGTGCACAAGTTTGTTTGTTCATTTCTTCAAAAGCCTTCAAGATTACAGGAATAGATGATAGAAGATATTGGAATTATGTTCCGACTGAGGAATCCAGGTTTAAGAGTGTTGCATATCTTCAACAAATGTGGTGGGTTGAAGTAATAGGGGAGCTAGAGTTTGAGTTTCCAAAGGGAAACTATAGTGTATTTTTCAAGCTTCAATTGGGGAAGCCCACAAAGAGATTGGGCCGAAGAGTGTGCAACCTTGATCAAGTTCATGGATGGGACATCAAGCCCGCCAGATTTCAGCTGTCTACATCTGACGGCCAGAGTTCAGTCTCACAGTGCTATCTGCGCGGGCCTGGAGAATGGGCCCACTATCATGTTGGGGACTTTGCAGTTGAGAAGCCCAATGGGCCAACAAATATCAAGTTTTCTTTGGCCCAAATTGATTGCACGCACACCAAAGGTGGGCTTTGCATAGATGGGGTAGTGATTTGCCCAAAGGAGTTTTCAGAAAGGCTGAAACAGTTTTAA 882 0.4365 MGAAVSTSATENDEVPTFSLSSPHTTTLDDVPENCISSLMMSFHPQEICTLARVNKAFHRASSADFVWESKLPSNYKFLLNKLLPQHNNLSSSMSKKEIYAKLCTPNFFDHGTKEIWLDRSSAQVCLFISSKAFKITGIDDRRYWNYVPTEESRFKSVAYLQQMWWVEVIGELEFEFPKGNYSVFFKLQLGKPTKRLGRRVCNLDQVHGWDIKPARFQLSTSDGQSSVSQCYLRGPGEWAHYHVGDFAVEKPNGPTNIKFSLAQIDCTHTKGGLCIDGVVICPKEFSERLKQF 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g01981 293 SUPERFAMILY F-box domain 16 104 IPR036047 GO:0005515
Vimu8g01981 293 PANTHER F-BOX PROTEIN PP2-A15 13 290 - -
Vimu8g01981 293 MobiDBLite consensus disorder prediction 1 25 - -
Vimu8g01981 293 CDD F-box_AtSKIP3-like 28 73 - -
Vimu8g01981 293 Pfam Phloem protein 2 125 283 IPR025886 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g01981 Vimu-Chr8 25661307 25663983 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g01981 - - gmx:100816360 520.776
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu8g01981 8 25661307 25663983 Vimu3g03100 3 44746400 44748863 ECH
Vimu8g01981 8 25661307 25663983 Vimu8g01981 8 25661307 25663983 ECH
Vimu8g01981 8 25661307 25663983 Vimu3g03100 3 44746400 44748863 PCT