Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g01901 ATGGCTTGCTGGTCTGCAGAAAATGCCACAAAGGCCTATCTCAACACACTGAAAATGGGTCAAAATGCCAAAGAGCCAGCAGTTGCAGAGTTCATATCAGCACTAGCTGCTGGAAACAATGCACAACTGATGGTTGTGGCGTGTGCTGGTGCAGCAGACTCCACCACACTAGCATTGGTCAGTGCTGCACACCAAACCGGTGGCCATGTTGTTTGCATTGTCTCTGGCCATGATGAATTGAATGCCTCAAAAAAGGTTCTTGGAGTGAATGCCAGTGAAGTCCAGTTCATGGTTGGAGAGGTTCAACAGGAACTGCTGTTGTTGAGACAAGCAGATTTTGTGGTGATTGATTGCAACCATGTTAGCCATGGAGAGATTGTTAAAGTAATCCAAGATGGTGGGATGCAAAATGGTGCAGTGGTTGTTGGCTGCAATGCACTTAGCTGCAGAGGGTCATGGTGGTCTTGTGGATCAAAAACTCAGTTGCTGCCTATAGGAAAAGGGCTTCTGGTTACAAGATTTGGAGGAAGTGCTGCAAGCCCAAAACATGGATCTGGAGTGAGTAAGAGTAGAAGTAGTCGTTGGATTGTTAAGGTAGATAAATGCACTGGTGAAGAACATGTGTACAAGATCAGAGTTCCACAGGGAAAAGTGATTCAAGCTTAA 666 0.458 MACWSAENATKAYLNTLKMGQNAKEPAVAEFISALAAGNNAQLMVVACAGAADSTTLALVSAAHQTGGHVVCIVSGHDELNASKKVLGVNASEVQFMVGEVQQELLLLRQADFVVIDCNHVSHGEIVKVIQDGGMQNGAVVVGCNALSCRGSWWSCGSKTQLLPIGKGLLVTRFGGSAASPKHGSGVSKSRSSRWIVKVDKCTGEEHVYKIRVPQGKVIQA 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g01901 221 Gene3D Vaccinia Virus protein VP39 5 175 IPR029063 -
Vimu8g01901 221 Pfam Protein of unknown function (DUF1442) 3 210 IPR009902 -
Vimu8g01901 221 PANTHER DUF1442 FAMILY PROTEIN 3 210 IPR009902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g01901 Vimu-Chr8 24649110 24649966 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g01901 - - gmx:100805528 383.259
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu8g01901 8 24649110 24649966 Vimu8g01901 8 24649110 24649966 ECH
Vimu8g01901 8 24649110 24649966 Vimu3g02367 3 38124105 38124870 PCT