Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g02367 ATGGCTTGCTGGTCTGCAGAAAATGCCACAAAGGCCTATCTCAGCACTTTGAAAATGGGTCAAAAGTGCAAAGAGCCAGATGTGGCTGAGTTCATATCAGCACTTGCTGCAGGAAATAATGCACAACTGATGGTTGTGGCATGTGGTGGTGCAGCAGACTCCACCACACTTGCATTGGTTGCTGCTGCTCATCAAACTGGTGGCCAAGTGATTTGTGTTGTCCCTGGCCATGAAGAGCTGAGAGCCTCAAAAGTTGCCTTGGGAGTGGCTTCTCATAAAGTTCAATTCATGGTAGGAGAAGCTCAGGAGCTTCTGTTAAAGCAATATGATCAGGTAGCAGATTTTGTTCTGATTGACTGCAACCTTGAGAAGCACGAAGAGATTTTGAAAGCAGTTGAAGAAGGTAGGAAGCAAAATGGGACGGTGGTTGTGGGGTACAATGCATTTAGCTGCAGAAAGTCTTGCTTGGCATGTGGATCAAAAACACAGCTTCTTCCCATAGGAGAAGGTTTGCTAGTGACTAGATTTGGAATGACCGAAACAAGTCCAAAGTATGGAAGCAGAATGGGAAAGTTCAAAAGCCGTTGGGTTGTCAAGGTAGATAAATGCACAGGCGAAGAACATGTGTTCAGAGTCAGATCTCCTCACAGGAAAGTCATCCAAGCTTAA 669 0.4544 MACWSAENATKAYLSTLKMGQKCKEPDVAEFISALAAGNNAQLMVVACGGAADSTTLALVAAAHQTGGQVICVVPGHEELRASKVALGVASHKVQFMVGEAQELLLKQYDQVADFVLIDCNLEKHEEILKAVEEGRKQNGTVVVGYNAFSCRKSCLACGSKTQLLPIGEGLLVTRFGMTETSPKYGSRMGKFKSRWVVKVDKCTGEEHVFRVRSPHRKVIQA 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g02367 222 PANTHER DUF1442 FAMILY PROTEIN 3 211 IPR009902 -
Vimu3g02367 222 Pfam Protein of unknown function (DUF1442) 3 211 IPR009902 -
Vimu3g02367 222 Gene3D Vaccinia Virus protein VP39 5 175 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g02367 Vimu-Chr3 38124105 38124870 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g02367 - - gmx:100816283 410.994
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu3g02367 3 38124105 38124870 Vimu3g02367 3 38124105 38124870 ECH
Vimu8g01901 8 24649110 24649966 Vimu3g02367 3 38124105 38124870 PCT