Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g01639 ATGATCACCTTACTAGACTTCTACCATGTCATGACTGCAATGGTGCCACTCTATGTGGCTATGATACTAGCCTATGGCTCAGTTAAGTGGTGGAAGATTTTCTCCCCTGACCAATGTTCTGGCATCAACCGTTTTGTGGCACTCTTTGCAGTGCCTCTTCTCTCCTTCCACTTCATAGCATCCAACAACCCTTACAAGATGAACCTTAGGTTCCTGGCTGCTGACACCCTTCAGAAGATCATCATACTAGTCCTTCTTGCAGTCTGGAGCAACTTCACCAAAAGGGGTTGCTTGGAGTGGACCATAACTTTGTTCTCCCTCTCCACCCTCCCCAACACCTTGGTCATGGGCATCCCTTTGCTCAAAGGTATGTATGGTGAGTTCTCTGGGAGCCTCATGGTTCAGATTGTGGTCCTTCAGTGCATCATTTGGTACACCTTGATGCTGTTCATGTTTGAGTTCAGGGGTGCCAGAATGCTTATCTCTGAGCAGTTCCCTGACACTGCTGGCTCCATTGTCTCCATCCATGTCGACTCTGATGTCATGTCATTGGATGGAAGGCAACCGCTTGAGACTGAAGCTGAGATCAAAGAAGATGGGAAACTCCATGTCACTGTGAGGAAATCCAATGCCTCAAGATCAGACATCTTCTCTAGAAGGTCTCAGGGTCTCTCTTCCACCACTCCACGCCCTTCTAACCTCACAAATGCAGAGATATACTCTTTGCAGTCTTCTCGGAACCCAACTCCAAGAGGCTCTAGCTTCAACCACACTGACTTCTACTCCATGATGGCTGCCGGTGGCAGAAACTCCAACTTTGGAGCCTCCGATGTTTATGGTCTTTCAGCTTCGAGAGGACCAACTCCAAGGCCTTCTAACTACGATGAAGATGGTGGAAAGCCAAAGTTTCATTACCATGCCGGTGGAACCGGACACTACCCTGCACCAAACCCTGGCATGTTCTCTCCCTCCAATGGCTCCAAAAGTGTTGCTGCTGCCAATGCTAATGCTAATGCCAAGAAGCCTAATGGGCAGGCTCAGCTGAAGCCTGAGGATGGGAATAGGGACCTTCACATGTTTGTTTGGAGTTCAAGCGCTTCACCGGTTTCTGATGTGTTTGGTGGCCATGAGTATGGAGGTCATGATCAGAAAGAAGTCAAATTGAATGTATCTCCAGGAAAAGTGGAGAATCATAGAGACACTCAGGAGGACTACCTGGAGAAAGATGAGTTCAGCTTTGGGAATAGAGGTATGGAGAGGGAGATGAATCAGCACGAGGGTGAGAAAGTTGGAGATGGGAAGCCAAAAACCATGCCTCCTGCAAGTGTGATGACAAGACTTATTTTGATTATGGTGTGGAGAAAACTCATCAGAAACCCCAACACCTACTCTAGTCTAATTGGTCTCACTTGGTCTCTTGTTTCATTCAGGTGGAATGTTGAGATGCCTGCCATAATAGCAAAGTCTATCTCCATATTGTCAGATGCAGGGCTTGGCATGGCCATGTTCAGTCTTGGTCTCTTCATGGCTTTGCAACCGAGGATCATAGCATGTGGAAATTCCATAGCAGCTTTTGCCATGGCTGTGAGATTCCTTACAGGTCCAGCTGTCATGGCAGCTGCTTCCATTGCTGTTGGACTCAAAGGTGTTCTCTTACACGTTGCCATTGTTCAGGCAGCTCTTCCGCAAGGAATTGTCCCATTTGTCTTTGCTAAGGAATATAATGTACATCCTGATATTCTCAGCACAGCTGTTATTTTTGGGATGTTGATTGCGTTGCCCATAACTCTGGTGTACTACATTTTGATGGGGTTGTGA 1818 0.4725 MITLLDFYHVMTAMVPLYVAMILAYGSVKWWKIFSPDQCSGINRFVALFAVPLLSFHFIASNNPYKMNLRFLAADTLQKIIILVLLAVWSNFTKRGCLEWTITLFSLSTLPNTLVMGIPLLKGMYGEFSGSLMVQIVVLQCIIWYTLMLFMFEFRGARMLISEQFPDTAGSIVSIHVDSDVMSLDGRQPLETEAEIKEDGKLHVTVRKSNASRSDIFSRRSQGLSSTTPRPSNLTNAEIYSLQSSRNPTPRGSSFNHTDFYSMMAAGGRNSNFGASDVYGLSASRGPTPRPSNYDEDGGKPKFHYHAGGTGHYPAPNPGMFSPSNGSKSVAAANANANAKKPNGQAQLKPEDGNRDLHMFVWSSSASPVSDVFGGHEYGGHDQKEVKLNVSPGKVENHRDTQEDYLEKDEFSFGNRGMEREMNQHEGEKVGDGKPKTMPPASVMTRLILIMVWRKLIRNPNTYSSLIGLTWSLVSFRWNVEMPAIIAKSISILSDAGLGMAMFSLGLFMALQPRIIACGNSIAAFAMAVRFLTGPAVMAAASIAVGLKGVLLHVAIVQAALPQGIVPFVFAKEYNVHPDILSTAVIFGMLIALPITLVYYILMGL 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g01639 605 PANTHER AUXIN EFFLUX CARRIER COMPONENT 1B-RELATED 1 604 - -
Vimu8g01639 605 MobiDBLite consensus disorder prediction 213 235 - -
Vimu8g01639 605 NCBIfam auxin efflux carrier 1 605 IPR014024 -
Vimu8g01639 605 Pfam Membrane transport protein 9 600 IPR004776 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g01639 Vimu-Chr8 22230206 22233337 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu8g01639 1 596 Organic Solute Cotransporters AT1G73590 74.522 0.0 872
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g01639 K13947 - gmx:100499637 1174.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g04931 11 68802515 68805737 Vimu8g01639 8 22230206 22233337 PCT