Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g04931 ATGATAACTTTGGCCGACTTTTACCACGTCATGACTGCAATGCTGCCACTCTATGTGGCCATGATACTTGCTTATGGTTCGGTGAAATGGTGGAAAATCTTCTCCCCGGACCAATGCTCCGGCATAAACCGGTTCGTGGCTCTGTTTGCAGTCCCACTACTCTCCTTCCACTTCATCGCGTCGAACAACCCCTACGAGATGAACTTCCGGTTCATCGCGGCGGACACGCTGCAGAAGATGATCGTGTTGGTGGTGCTGACGATCTGGAGCAACGTGAGCAAGAGAGGGAGTTTGGAGTGGACCATAACGCTGTTCTCCATCTCCACCCTCCCGAACACGCTGGTGATGGGCATTCCGTTACTCAAAGGAATGTACGGGGAGTTCTCGGGGAGTTTGATGGTCCAGATAGTGGTACTCCAGTGCATCATCTGGTACACCTTGATGTTGTTCATGTTCGAGTACAGAGGCGCCAGAATGTTGATCTCTGAGCAGTTTCCAGACACTGGCGCCACCATTGTCTCCATCCACGTGGACTCCGACGTCATGTCGCTTGATGGACGACAGCCCTTGGAAACCCAAACCCAAATCAAAGAGGACGGAAAGCTCCACGTCACCGTCAGAAAATCCAACGCCTCCAGATCCGACATCTTTTCTAGAAGGTCCCAGGGCTTCTCTTCCACCACTCCTCGCCCTTCCAACCTCACCAATGCAGAGATTTACTCTCTCCAATCCTCCACCAACCCCACTCCCAGAGCCTCCAGCTTCAACCACTCCGACTTTTACTCCATGATGGCCCCTCCTCGTAACTCCAACTTCGCTACCAATGACGTTTATGGCTTCTCTGCTTCCAGAGGACCCACTCCCAGACCTTCCAATTACGACGAAGATGCTTCCACCGCTGCTTATACTAACAACAACGACAAACCCAGACATCATTACCCTGCTCCTAACCCCGGCATCTTCTCCCCCGCCACGTATAAAAATGCTCCCAAGAAGCCCAATGGACAACCCCACGCCCACCCCAAACCAGAGGATTCAAACAAGGAACTTCATATGTTCGTTTGGAGTTCAAGTGCTTCCCCTGTTTCCGATGTGTTTGCTGGACATGAAAACGACCATAAAGAAGTGAAGCTCGCCGTGTCTCCCAAAAAAGTGGAAGGTAACAGAGACGGTCAAGAAGAGTACCTTGAGAAAGACAGTTTTAGTTTTGGAAATAGAGGAGCTGAAAATGAGCATGAAGGTGAGAAAGTTGGGAACGGAAATCAAAAAGCTATGCCTCCAACGAGTGTAATGACACGGCTTATTTTGATCATGGTGTGGAGGAAACTCATCCGAAACCCCAACACCTACTCCAGCCTCATCGGCCTAACTTGGTCACTTATTTCATTCAGGTGGAACGTTGAAATGCCCATGATAATTGCCAAGTCCATTTCCATATTGTCAGATGCAGGGCTTGGAATGGCCATGTTTAGTCTTGGTCTGTTCATGGCTTTGCAACCGAGGATCATAGCATGTGGAAATTCCACAGCAGCTTTTTCCATGGCCGTGAGATTCCTTACAGGTCCAGCTGTCATGGCAGCTGCTTCCATGGTCGTTGGACTCAAAGGTGTTCTCTTACACGTTGCCATCGTTCAGGCAGCTCTTCCTCAGGGAATTGTCCCATTTGTCTTTGCAAAGGAATACAGTGTCCACCCTGATATTCTCAGCACAGGAGTTATTTTTGGGATGTTGATTGCATTGCCCATTACACTGGTGTACTACATCTTGCTGGGGTTATGA 1779 0.4958 MITLADFYHVMTAMLPLYVAMILAYGSVKWWKIFSPDQCSGINRFVALFAVPLLSFHFIASNNPYEMNFRFIAADTLQKMIVLVVLTIWSNVSKRGSLEWTITLFSISTLPNTLVMGIPLLKGMYGEFSGSLMVQIVVLQCIIWYTLMLFMFEYRGARMLISEQFPDTGATIVSIHVDSDVMSLDGRQPLETQTQIKEDGKLHVTVRKSNASRSDIFSRRSQGFSSTTPRPSNLTNAEIYSLQSSTNPTPRASSFNHSDFYSMMAPPRNSNFATNDVYGFSASRGPTPRPSNYDEDASTAAYTNNNDKPRHHYPAPNPGIFSPATYKNAPKKPNGQPHAHPKPEDSNKELHMFVWSSSASPVSDVFAGHENDHKEVKLAVSPKKVEGNRDGQEEYLEKDSFSFGNRGAENEHEGEKVGNGNQKAMPPTSVMTRLILIMVWRKLIRNPNTYSSLIGLTWSLISFRWNVEMPMIIAKSISILSDAGLGMAMFSLGLFMALQPRIIACGNSTAAFSMAVRFLTGPAVMAAASMVVGLKGVLLHVAIVQAALPQGIVPFVFAKEYSVHPDILSTGVIFGMLIALPITLVYYILLGL 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g04931 592 PANTHER AUXIN EFFLUX CARRIER COMPONENT 1B-RELATED 1 592 - -
Vimu11g04931 592 MobiDBLite consensus disorder prediction 384 424 - -
Vimu11g04931 592 MobiDBLite consensus disorder prediction 213 235 - -
Vimu11g04931 592 MobiDBLite consensus disorder prediction 281 346 - -
Vimu11g04931 592 MobiDBLite consensus disorder prediction 384 418 - -
Vimu11g04931 592 NCBIfam auxin efflux carrier 1 592 IPR014024 -
Vimu11g04931 592 Pfam Membrane transport protein 9 587 IPR004776 GO:0016020|GO:0055085
Vimu11g04931 592 MobiDBLite consensus disorder prediction 281 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g04931 Vimu-Chr11 68802515 68805737 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g04931 1 583 Organic Solute Cotransporters AT1G73590 69.614 0.0 826
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g04931 K13947 - gmx:100786572 1017.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g04931 11 68802515 68805737 Vimu11g04931 11 68802515 68805737 ECH
Vimu11g04931 11 68802515 68805737 Vimu8g01639 8 22230206 22233337 PCT