Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g01537 ATGAAGCAGAAGGAGCAACAAGGCAAAGGTGAAGGTTCATATCTGAAACTCTTTTTTGCTCAACTAGACCTTCTCAACTTCTTTGCTCATGCTCTAGTTTTTGGCATTGGTTTACTCATTGGAATCACACTCACTTTCTTTCTCAACAATTTCTCCTTCGTCAACTTTCAAATCCAACAATCTTCCCTTTCATCCAATGCCGCCGAACCGCCACCGTCACCACCGCCGTCACGGCCACCCTTTTCTCCGATCTCCTCCAACATCTCTTCACCAATATCAGCCACCCCAACAAAAAATATATCTCAGTATTTTGATTCTTCACCCCAGAAAGACAACCAAACCATACCTTCTTCTGATTCCTCCTTGGTCAACAACAAAACAAGTGTGACGAATTTCACCAGAATCGGGTTGAGTGAATTCTTGAAGCCCCCCATGGCCATGCATGATATGAACGACGAAGAGTTGTTGTGGAAAGCTTCCATGGTTCCCATGATTCACAATCTCCCATTCAAACAGACTCCGAAGGTTGCATTCATGTTTCTGACAAAAGGGCCTGTGATGTTGGCTCCTCTGTGGGAGAGATTCTTCAAAGGAAATGAAGGGTTGTATTCTATCTATGTCCATTCCCACCCTTCTTTCAATGAAACAGTGCCTCCAAGCTCTGTCTTCCATGGCCGCAATATCCCTAGCAAGGAAGTAAGGTGGGGTGAGAACAGCATGATAGAAGCAGAGAGAAGGCTATTAGGGAATGCACTCCTTGATTTCTCCAACCAACGTTTTGTGCTACTCTCAGAATCATGCATCCCTTTGTTCAACTTCAACACCATCTACACTTACCTAATGAACTCAACCAAGACCTTTGTGGAGGCCTACGATCAGCCAGGTGAAGTGGGCCGTGGCAGGTACAGGCCCAAAATGAGGCCCCAGATCAGCCTCTCCCAATGGAGAAAAGGGTCTCAATGGTTCCAAATAGACCGTTTTCTAGCCCTTCAAATAGTCTCTGACCATCACTACTTCCCAGTCTTCTTAAAGTACTGCAACCCTAATTGCTACAGTGATGAACACTACTTGCCCACATTTATCAGCATCAAGTTTTGGAAGAGAAACTCTAACAGGACATTGACATGGGTTGATTGGTCAAAGGGTGGTGCTCATCCTTCAAGGTATTACAGAAATCATGTGACCAATGAATTTTTGAACAAGCTGAGGTTTGGAACATCATGCGAGTACAATGGTCACACCACAAATATTTGTCATTTGTTTGCAAGGAAATTCACCACTCATGCTTTGGGTAGATTGCTCAGATTTGCTCCAAAGCTCATGCAATTCAATTGA 1335 0.4419 MKQKEQQGKGEGSYLKLFFAQLDLLNFFAHALVFGIGLLIGITLTFFLNNFSFVNFQIQQSSLSSNAAEPPPSPPPSRPPFSPISSNISSPISATPTKNISQYFDSSPQKDNQTIPSSDSSLVNNKTSVTNFTRIGLSEFLKPPMAMHDMNDEELLWKASMVPMIHNLPFKQTPKVAFMFLTKGPVMLAPLWERFFKGNEGLYSIYVHSHPSFNETVPPSSVFHGRNIPSKEVRWGENSMIEAERRLLGNALLDFSNQRFVLLSESCIPLFNFNTIYTYLMNSTKTFVEAYDQPGEVGRGRYRPKMRPQISLSQWRKGSQWFQIDRFLALQIVSDHHYFPVFLKYCNPNCYSDEHYLPTFISIKFWKRNSNRTLTWVDWSKGGAHPSRYYRNHVTNEFLNKLRFGTSCEYNGHTTNICHLFARKFTTHALGRLLRFAPKLMQFN 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g01537 444 PANTHER CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN-RELATED 125 434 IPR044174 GO:0016757
Vimu8g01537 444 MobiDBLite consensus disorder prediction 64 88 - -
Vimu8g01537 444 Pfam Core-2/I-Branching enzyme 176 402 IPR003406 GO:0016020|GO:0016757
Vimu8g01537 444 MobiDBLite consensus disorder prediction 100 122 - -
Vimu8g01537 444 MobiDBLite consensus disorder prediction 68 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g01537 Vimu-Chr8 21252815 21256947 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g01537 - - gmx:100791882 689.493
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu8g01537 8 21252815 21256947 Vimu8g01537 8 21252815 21256947 ECH
Vimu11g04789 11 67970317 67970850 Vimu8g01537 8 21252815 21256947 PCT