Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g04789 ATGAACACCATCATGAAGGCTAAGCAGCAAGAACGGTCTCTTGCTGCTGTCAATTTCTTCAGTGCTCAATCACACTTGTTCAAATTCTTCTCTCATGTTCTTGCATTTGCCTCTGGTTTGCTCATCGGAATCACCATCATCACTTTCTCTCTCAAAAGCTTTTCCCCAAACTTTCATTCCCTTCAATCTCTGCCTGCTTCAATCTCAACTTTGCACAATGCTTCAAAAGTCACCATCTTCACTCCAAACGAGTCAACCAAGGCTATGGATGACATGACAGAGGAAGAGTTGCTGTGGAGAGCTTCCATGGTTCCTAGGATTAAGGAAATGCCCTACAAACACCCCCCAAAGGTTGCATTTATGTTTCTGACAAAAGGGCCAATCTTTTTGGGTCCACTCTGGGAGAGATTCTTCAAAGGAAATGAAGGCTTCTATTCTATCTACGTCCATTCCCATCCTTCTTTCAATCAAACACTGCCTCAAACTTCTGTCTTTCATGGCCGCAGAATCCCAAGCAAGGTCAGTGTGTCCTAA 534 0.4382 MNTIMKAKQQERSLAAVNFFSAQSHLFKFFSHVLAFASGLLIGITIITFSLKSFSPNFHSLQSLPASISTLHNASKVTIFTPNESTKAMDDMTEEELLWRASMVPRIKEMPYKHPPKVAFMFLTKGPIFLGPLWERFFKGNEGFYSIYVHSHPSFNQTLPQTSVFHGRRIPSKVSVS 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g04789 177 PANTHER CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN-RELATED 55 174 IPR044174 GO:0016757
Vimu11g04789 177 Pfam Core-2/I-Branching enzyme 118 176 IPR003406 GO:0016020|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g04789 Vimu-Chr11 67970317 67970850 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g04789 - - gmx:100815747 239.965
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g04789 11 67970317 67970850 Vimu11g04789 11 67970317 67970850 ECH
Vimu11g04789 11 67970317 67970850 Vimu8g01537 8 21252815 21256947 PCT