Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g01522 ATGCCATGTTCCAAAGAAGAAGCTCTTGTTAGACTCTTCTACAATGTCTCTAGCTCCTTCCACCTTCTCTTCCTCCTCCTCTTCTCTTCTTCCCTTTTGCTTATCAACTTCTTGAACTTCATTGCCAGCTTCACCATCTTCCAAAGAGATCACCACTATTATGAATATGTGTCTTCTGAGTTCGATGAAGAAGAAGAAGAAGAAGAAGAAGAAATTCAAGAAAGATACTCTTATGAGCATGATTCTGGTGAGTCAGATCACCTCGTAGCTGACATCATTGCTGGTGGAGAAACCCTTTTGTTTGTGCACAACGACCAGCCTCTGAGAACTCATTCTTCTTCTGATGAATTCACAAGCCCCCGTGATAGCCTTGTTGAAGAAGAGTTAGAAGAAAACTATTCAACAGAAACCTTGTTTTTTCACAAACCTTTTGTCTCAGACATAGAAAATGTACAAGAGGTAGAAGAATTTCCAGCTGAAGATGCTGATTCTGTTCCAAATTCTATCCCTGATGAAAGCAGGCCCACATCGCCCATCACCCTTAACCTCTACAAAAGTGACTCACCAGACAGTGACAAAAACTGTGACGAAGATCGTGTTGGAATTGGACTTGTTGAAAATAAGAAGCTGCAAGAGGAAAATCTCACACGAGATGAGAGATTCTTGGTCTATGATCCTACCCAATTGGAGGCCAAGAAGCTCATTGTTCAGGAAAAGGATGATGAAGAAATATATGGTGACTCATGCACTGTTGGATCCACTTCTAAGAGTTCCTCTGAGTGGAGGAGCTCTATTAACTGCAGAGATTCTGGAACTGATGACCCTTTTTCTTCCTCATCAAGAAGAAGTTGTCCCAAGTGGGAATCATACACAGTTTTCCAAAAGTATGATGAAGAAATGTCATTCCAAGATAGAATTAGTGCACAGAAACTTCAAGAAATTGAATCTTTAAGGTCTATCAAGGTATCTCCGAGGTCAATTTCAGAGCGCATTGTGTTCAAGTTTTCAAGTATAAACAAGAAACCAAATGATACACGTCACAATCCATATCATGAACTTGAGGCTGCATATGTCGCACAAATTTGCTCAACATGGGAAGCTCTTAATTGGAACTACAAGAATTTTCAATCCAAGCGAGCTTCACGAAGCCATGATGTTGATGTGGGTTGTCCAGCCACCATTGCACAGAGATTACAACAATTTCAAGTGTTGTTGCAGAGATACATAGAAAACGAGCCTTATGAGCATGGTAGAAGACCAGAGATCTATGCTAGAGTGAGGCATTTGGCTCCAAAATTGCTACTAGTACCAGAATATCGAGAAACAGAAGATGATGAGAGAGAAGAAAATGGTGTTCAGTCAAAAATATCATCAGCTTCATTTCTTACGATAATGGAAGATGGGATAAGAACGTTCATGAGTTTTCTGAAGGCTGATAAAGAGAAACCAAGTCAGATATTCGCAGCTTACTTTCGGAGAAACCGAAGACCCTTGGTTGATCCAACACTTCTACGCCTCACCAAGAAAAAGAAGATGAAAGTGAAGGAGCTTCGACGTTCAAGAAAATGCTTGAGGAAGAGAAAGCTGAAGGGAGAAGAAGAGATGGAGATTTTGATGGCACTGATAGACCTGAAAATGGTGTCAAGAGTTTTGAGAATGAGTGAGTTAAGTGAGGAACAGTTGCATTGGTGTGAAGAGAAGATGAGGAAAGAAAAGAAGGGTAAAGAGATGAATGTTGAAAGTGAAAGAGCAGAGACAAAGCAAGGAATGAAGATAGAGACAAGAATGAACAGCTTTAGTGTGCTTTAG 1809 0.4041 MPCSKEEALVRLFYNVSSSFHLLFLLLFSSSLLLINFLNFIASFTIFQRDHHYYEYVSSEFDEEEEEEEEEIQERYSYEHDSGESDHLVADIIAGGETLLFVHNDQPLRTHSSSDEFTSPRDSLVEEELEENYSTETLFFHKPFVSDIENVQEVEEFPAEDADSVPNSIPDESRPTSPITLNLYKSDSPDSDKNCDEDRVGIGLVENKKLQEENLTRDERFLVYDPTQLEAKKLIVQEKDDEEIYGDSCTVGSTSKSSSEWRSSINCRDSGTDDPFSSSSRRSCPKWESYTVFQKYDEEMSFQDRISAQKLQEIESLRSIKVSPRSISERIVFKFSSINKKPNDTRHNPYHELEAAYVAQICSTWEALNWNYKNFQSKRASRSHDVDVGCPATIAQRLQQFQVLLQRYIENEPYEHGRRPEIYARVRHLAPKLLLVPEYRETEDDEREENGVQSKISSASFLTIMEDGIRTFMSFLKADKEKPSQIFAAYFRRNRRPLVDPTLLRLTKKKKMKVKELRRSRKCLRKRKLKGEEEMEILMALIDLKMVSRVLRMSELSEEQLHWCEEKMRKEKKGKEMNVESERAETKQGMKIETRMNSFSVL 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g01522 602 PANTHER DNA LIGASE (DUF1666)-RELATED 12 570 - -
Vimu8g01522 602 MobiDBLite consensus disorder prediction 574 590 - -
Vimu8g01522 602 MobiDBLite consensus disorder prediction 246 283 - -
Vimu8g01522 602 MobiDBLite consensus disorder prediction 248 283 - -
Vimu8g01522 602 MobiDBLite consensus disorder prediction 158 195 - -
Vimu8g01522 602 MobiDBLite consensus disorder prediction 169 188 - -
Vimu8g01522 602 Coils Coil 514 534 - -
Vimu8g01522 602 Pfam Protein of unknown function (DUF1666) 352 570 IPR012870 -
Vimu8g01522 602 MobiDBLite consensus disorder prediction 574 602 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g01522 Vimu-Chr8 21124781 21127838 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g01522 - - gmx:100786564 833.943
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu8g01522 8 21124781 21127838 Vimu8g01522 8 21124781 21127838 ECH
Vimu11g04770 11 67859209 67861771 Vimu8g01522 8 21124781 21127838 PCT