Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g04770 ATGTCTCAAGCCCTCTTCACCTTCTCTTTCTCCTTCTCTTCTCCTCTGCCGTTTTCCTTCTCACCTTCTTCACCTTCTCAGGCAGATACCCTTTCATCCAAAGAATATGAGTATGTGTACACCGAGGATGAAGAAGAAGAAGATACTCAAGAAGGGTATTCTTGTGTTGATTCTACCGAGGGAGGAAACATCACTTATGGGAAAGAAGTTCCTGTGTTTGTGCACAATGAGAGGCATCAAAGGACTCATTCTTATTCGGAAGAATTCGTAAGCCCCAGAGAGAGCTTGAATGAAGAGTCAGAAGAAAAACATTATTCTGAAACGTTGTCTCTCCATAAGTCTCCGCTAGTTTCTGACTTCGACAATGAAGAGGCAGAAACGGTCGAAGAAGACTTTACAGCAAGAGATTCTGATTCTGTTCCAAATTCTACCAAAGTTGAAAGCAGGAACACCTCCCCCCTCAACCTCAACGCGTACAAAGGAAAAAAAAACCATGACGACGATCACGTTAGCGTTGAAATTATCAGAAACAAGAAGGTGCAAGAGCCAAACCCTGCAAGGGATGAGAGATTCTTTGTTTTTGCTTCTACCCAGTTGCAGAGTAAGAAGTTGATGGTTGAAGAGAAGGATGATGAGTCCTCTAAATGGAAGAGCTCCATCAATTGCAGGGATTCCGAGACTGAGGAGGATGCATTTTCTTCTTCATCCAGAAGAAGTTGCCCCAAGTGGGAATCATACACATTGTTCCAAAAATATGATGAAGAAATGGCAATCCTAGACAGAATTAGTGCACAGAAACTTCATGAAACAGTGTCTCCAAGATCAATGTCAGAGCGTATTGTGTACAAGTTTCAGACTATAAATAAAAAATCTATTGATGTTGGTCACAACCCATATCGTGAACTAGAGGCTGCATACGTAGCACAAATTTGCTTGACATGGGAAGCCCTTAGTTGGAACTACAAAAATTTTCGTTCCAAACATGCCTCACTCCAGGACAATGACACGGGTTGTTCTGCCACAATTGCTCAACAATTCCAGCAGTTTCAGGTTTTGTTACAGAGATACATTGAGAATGAGCCTTATGAACACGGTAGGAGACCTGAAATATATGCTAGAATGAGACTTTTGGCACCCAAATTGCTCCTTGTGCCAGAATATCAAGGTATGAATATATTAGTTTTCATTCCTCTAATAGAAGCACATTTCATAGGTCACAAGGAGGATCAGAAGGATGGTGGTTTTCAATGCAAAATATCATCAGCTTCATTTCTGAAGATAATGGAGGATGGGATTAAAACATTCATGAATTTTCTAAAGAATGATAAAGAGAAACCCTGTCAGATCCTTGCAGCCTACTTCAGGAGAAACCAAAGAGGCACAGTTGATCCAACACTACTGGGATTAATGAAGAAGAAGAGGGTGAAGGTTAAAGATCTTAACCATGCAGGGAAATGCTTGAGGAAGAGAAAGTTAAAGGTGGAAAAGGATATGGATATTTTGATGGCTCTGACAGACCTAAAAGTGGTGTCAAGGGTTTTAAGGATGAGTGAATTGAGTGAAGAACAATTGCATTGGTGTGAGGAGAAGATGAGCAAAGTTAAAGAAAATGGAGCCATTCTACAAATTGAAACAACAAACATGTGGAAACATGGATTGTGGTGTTCAAATTCAGAGAATGTTTATGTTATTATGCATTTTGAAGGTACAAGGTCAGAGACAGAAGTGTTGAATCCAAATAAGAATGAACAAGGCTGTCACAGATGA 1767 0.4029 MSQALFTFSFSFSSPLPFSFSPSSPSQADTLSSKEYEYVYTEDEEEEDTQEGYSCVDSTEGGNITYGKEVPVFVHNERHQRTHSYSEEFVSPRESLNEESEEKHYSETLSLHKSPLVSDFDNEEAETVEEDFTARDSDSVPNSTKVESRNTSPLNLNAYKGKKNHDDDHVSVEIIRNKKVQEPNPARDERFFVFASTQLQSKKLMVEEKDDESSKWKSSINCRDSETEEDAFSSSSRRSCPKWESYTLFQKYDEEMAILDRISAQKLHETVSPRSMSERIVYKFQTINKKSIDVGHNPYRELEAAYVAQICLTWEALSWNYKNFRSKHASLQDNDTGCSATIAQQFQQFQVLLQRYIENEPYEHGRRPEIYARMRLLAPKLLLVPEYQGMNILVFIPLIEAHFIGHKEDQKDGGFQCKISSASFLKIMEDGIKTFMNFLKNDKEKPCQILAAYFRRNQRGTVDPTLLGLMKKKRVKVKDLNHAGKCLRKRKLKVEKDMDILMALTDLKVVSRVLRMSELSEEQLHWCEEKMSKVKENGAILQIETTNMWKHGLWCSNSENVYVIMHFEGTRSETEVLNPNKNEQGCHR 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g04770 588 PANTHER DNA LIGASE (DUF1666)-RELATED 36 537 - -
Vimu11g04770 588 MobiDBLite consensus disorder prediction 39 60 - -
Vimu11g04770 588 MobiDBLite consensus disorder prediction 39 53 - -
Vimu11g04770 588 MobiDBLite consensus disorder prediction 79 109 - -
Vimu11g04770 588 Pfam Protein of unknown function (DUF1666) 301 546 IPR012870 -
Vimu11g04770 588 MobiDBLite consensus disorder prediction 137 158 - -
Vimu11g04770 588 MobiDBLite consensus disorder prediction 79 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g04770 Vimu-Chr11 67859209 67861771 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g04770 - - gmx:100776190 788.104
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g04770 11 67859209 67861771 Vimu11g04770 11 67859209 67861771 ECH
Vimu11g04770 11 67859209 67861771 Vimu8g01522 8 21124781 21127838 PCT