Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g01471 ATGATGCAACGGTTGGTTGATCATGTTCTTGCTATAACTAAAGAGTCCGTGAAGGCATTTACCTATGAGTCCTTAAACAATATTGTGAGGCTAATCAATGGAATATCTGCCCTTTTGTTGGCATGCCTACCTGGGAAAGCTAATATACTTGAAGGTATCCATGGTTGGGAACTCAGGCCAACTTTCCGTGGACCACGATTTCCGCGGTGGATGGAGAATGGTGTATCCTCTTTCAATCAGTTTGTCCATGATTTTTCCATGGATTCTGACAATTCAAGCCTTGAATACTCGTCCGAAGATGACGATAGTGAAATATATAGTGATGGACTTGAATACCCTCCAACTCCTGCATCTCAGAGTTCTAGAACCTCAGAAGCTGTTAACCTTTTTCGGTTAGTTTATTATGGGGTGTCAAAAGCCATGTCTTTCACCACAAATAAGCGTCCTCCTCATTTACGTGCACACAAGAGAGTGCTGAGTCTCAAGGATCATATTATCCACCGTGCTACTGATAGGAGACGAGGAGTTGTAGAGGATCTTCATCTAGGCATCGAGTTATCTATAGAAGCCGTGTTTGATGTTGTTCACAAGGCAGCACATCTTCTTCTTTCCCCTTCAGAAGCTTTTGGGGCATTAGTCAGGTTGTTTTCGTCTCATGAAAGTGCTGTTAAAGGAGATCCTGATGGTGAAGAGGACGCCTCCATATATACAGATACATTAGGAGAAAATGACCCAAAACCCAAAGAGAGAACTGTCAAGTATCAGCCTCTGAATACAGATGCTCGGACATGTCAAGATGTCATAACGGACCTTGGGTATCCATATGAAGCCATTCGTGTGATCACCTCTGATGGATATATTCTTCTTTTGGAAAGAATACCCAGGCGAGATTCAAGAAAAGCTGTTTATCTCCAGCATGGGGTTTTGGATTCATCAATGGGTTGGGTATCTAATGGAATTGTTGGCTCTCCAGCTTTTGCAGCATACGATCAAGGTTATGATGTATTTCTGGGGAATTTTCGTGGTTTGGTTTCACGGGAACATGTCAACAAGAACATATCATCACGTCAATATTGGCGGTATTCCATCAATGAGCATGGGACTGAGGATATTCCTGCTATGATAGAAAAAATCCATGAAGTAAAGATTGCTGAATTGAGGCTTACTAAACCTGATATAGAGGAGGAAACTGATGATGATCAGCCTTACAAACTTTGTGCCATTTGCCATAGTTTGGGAGGAGCTGCTGTACTGATGTATGTTATTACTCGAAGGATAGAAGGGAAACCCCATAGGCTTTCAAGATTGGTTTTGTTATCACCAGCCGGTTTTCACGAGGACTCTAACATGGTTTTTTCTGTGGCTGAACTTCTACTGGTTTTACTGGCTCCTGTTTTGTCTCTTCTTGTTCCTGCCTTCTATATACCAACCAGATTTTTTCGTATGCTTGTCAACAAGTTAGCGAGGGATCTGCATAACCTACCTGCAGTTGGAGGGTTGGTTCAAACTTTAATGAGTTATGTTGTTGGTGGAGACAGTTCAAACTGGGTTGGAGTTTTAGGATTACCACACTATAATATGAATGACATGCCAGGAGTAGCTTTTCGTGTTGCTCTCCATCTGTCACAGATGAAGCGCACTGGAAAATTCATAATGTTTGATTATGGTAGTACTTCTGCCAACATGGAAGTGTATGGTTCACCTGTGCCTTTGGACTTGGGTGAACGCTATGAACTCATAGACATTCCTGTTAATCTTGTTGCTGGACAGAAGGACAAAGTGATAAGGCCTTCAATGGTGAAGAGACACTATAAATTGATGAAGGGTGCTAGGGTAGATGTTTCATATAATGAGTTTGAATATGCACACCTAGACTTCACCTTTTCCCACCATGAAGAACTCTTGTCATTTGTTATGTCATGCTTGCTGCTTGTGGATCCTAATCCAAAACATCAAGTGAATCAAAGGGGTGTAAGGTCAAGAAGAAAAGGGCAAGTTGCAACCAGTGGTTAG 2013 0.4198 MMQRLVDHVLAITKESVKAFTYESLNNIVRLINGISALLLACLPGKANILEGIHGWELRPTFRGPRFPRWMENGVSSFNQFVHDFSMDSDNSSLEYSSEDDDSEIYSDGLEYPPTPASQSSRTSEAVNLFRLVYYGVSKAMSFTTNKRPPHLRAHKRVLSLKDHIIHRATDRRRGVVEDLHLGIELSIEAVFDVVHKAAHLLLSPSEAFGALVRLFSSHESAVKGDPDGEEDASIYTDTLGENDPKPKERTVKYQPLNTDARTCQDVITDLGYPYEAIRVITSDGYILLLERIPRRDSRKAVYLQHGVLDSSMGWVSNGIVGSPAFAAYDQGYDVFLGNFRGLVSREHVNKNISSRQYWRYSINEHGTEDIPAMIEKIHEVKIAELRLTKPDIEEETDDDQPYKLCAICHSLGGAAVLMYVITRRIEGKPHRLSRLVLLSPAGFHEDSNMVFSVAELLLVLLAPVLSLLVPAFYIPTRFFRMLVNKLARDLHNLPAVGGLVQTLMSYVVGGDSSNWVGVLGLPHYNMNDMPGVAFRVALHLSQMKRTGKFIMFDYGSTSANMEVYGSPVPLDLGERYELIDIPVNLVAGQKDKVIRPSMVKRHYKLMKGARVDVSYNEFEYAHLDFTFSHHEELLSFVMSCLLLVDPNPKHQVNQRGVRSRRKGQVATSG 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g01471 670 MobiDBLite consensus disorder prediction 92 121 - -
Vimu8g01471 670 Pfam Partial alpha/beta-hydrolase lipase region 265 319 IPR006693 GO:0006629
Vimu8g01471 670 Gene3D alpha/beta hydrolase 253 642 IPR029058 -
Vimu8g01471 670 MobiDBLite consensus disorder prediction 223 247 - -
Vimu8g01471 670 SUPERFAMILY alpha/beta-Hydrolases 263 627 IPR029058 -
Vimu8g01471 670 PANTHER LYSOSOMAL ACID LIPASE-RELATED 191 633 - -
Vimu8g01471 670 FunFam Gastric triacylglycerol lipase 253 643 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g01471 Vimu-Chr8 20821116 20826664 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu8g01471 2 654 Lipid Metabolism Gene Families AT1G18460 65.988 0.0 889
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g01471 - - gmx:100785512 1155.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu8g01471 8 20821116 20826664 Vimu8g01471 8 20821116 20826664 ECH
Vimu11g04736 11 67594512 67595042 Vimu8g01471 8 20821116 20826664 PCT