Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g04736 ATGTACACGGTTCTTGACATTGTTTTCCTTGCCTTTTTTAGTGGCGTGTCCTCTTTCAATCAGTTTATTCATGAGCTTTCTTTGGATTCTGATGTATCAAGCCAAGAATATTTATCTGGAGAAGAAGAAGGAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGACGACGGTGATGAATACGAAGAATATCCTAAAACTACCTTGTCTCGAAGATCTAGAGTCCCCAGAGCTGCTTTTGCTGATTACGGTAGACACCAGACGGATTGGATATTGATTCCTCTACAGTTCTTGATGGGTCTTCCATTTCGTCTTTTCCAATTAGTTTATTCTGGAGTGTCAAAAACGCGATCTATCTCTGGTTGTCAACATCCTTCACAACCACATTCACCCAATGGAGTGCAAAGCCTCAAGGATCAAATCATTCATCGTGCCACTGATAGGAGACGTGGGGTCATAGAGGTTGAGCAGAAATTTCTATCCTTATTACTTTATGTTGTGTTTCTGACCGTATATGTATGCTTTAGCTGA 531 0.403 MYTVLDIVFLAFFSGVSSFNQFIHELSLDSDVSSQEYLSGEEEGEEEEEEEEEEEDDGDEYEEYPKTTLSRRSRVPRAAFADYGRHQTDWILIPLQFLMGLPFRLFQLVYSGVSKTRSISGCQHPSQPHSPNGVQSLKDQIIHRATDRRRGVIEVEQKFLSLLLYVVFLTVYVCFS 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g04736 176 MobiDBLite consensus disorder prediction 36 62 - -
Vimu11g04736 176 MobiDBLite consensus disorder prediction 33 69 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g04736 Vimu-Chr11 67594512 67595042 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g04736 14 154 Lipid Metabolism Gene Families AT1G73920 33.099 6.34e-14 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g04736 - - pvu:PHAVU_002G315000g 192.971
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g04736 11 67594512 67595042 Vimu11g04736 11 67594512 67595042 ECH
Vimu11g04736 11 67594512 67595042 Vimu8g01471 8 20821116 20826664 PCT