Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g00936 ATGGAGTTCTTCCAAAAGGCAAAAGTGGTGCGTTTGAGAAGCTACCATGACAAGTACATGTTGGCCGACGAGAATCAAGAAAACGTCTTCCAAGACCGTAATGGTTGCTACAATAATGCTAAATGGGAAGTTGAGGTCATAGAAAATTCAAATTTCATTAGATTGAAAAGCTGCTATGGAAAATACCTAACAGCTTCAAACATGCCCTTTATATTGAGAGGAACAGGAAAAAATGTCTTCCAAACGTTGCCTTCTAGGTTGAATTCTTCTGTCGAATGGGAACCCATAAGAGAAGGAGTTCAAGTCAGATTAAGAACACGTTACGGACAATATCTTCGTGCCAATGGCGGCTTACCACCTTGGAGAAACACCATCACCCATGATGTTCCTCATCGTACCTCAACAGCAAATTGGATTTTGTGGGACGTTGACATAGTTGAGCTTCGACCTCGGAATCAACTCAAACCCCGACCAAGGCCAACACCTATTACACCTCCCGTTTCTCGTTCCTTGAATCCAACGCCCACATGTCTTTCACCTTCTTCGTGTCCATCGGCGATCATCGCAGACACCGATTCATTGGTAAAGATTGATCTCCGATCTCCCATAACGCCTGAGGCTGAAGATCATTCACAAGAGTGTTTATCACCGGTGAAAGAAGGAAGAGTTATATTTTATAATGTGGGTGACGAAAATGGTGATGTTGATGATGCAAAGAAAGAGTCATATTTTATCTTTAAAGGAAGTTGTGTGAATGAACTAAAAGATAAATTGAAAGAAGAAACAGGGCTTGATGATATTCTTGTCTGTTGTCGCAATCCATTCACTGCAAAACTTTATCCACTTCGTTTACAATTACCTCCTCATGCCAGTGACATGCATGTAGTTGTCGTTCCTTCTTCATTCAATGGTCAGTTTTTCCTTTACCTGTTTTATTATTCAATATTTCTATAA 954 0.4057 MEFFQKAKVVRLRSYHDKYMLADENQENVFQDRNGCYNNAKWEVEVIENSNFIRLKSCYGKYLTASNMPFILRGTGKNVFQTLPSRLNSSVEWEPIREGVQVRLRTRYGQYLRANGGLPPWRNTITHDVPHRTSTANWILWDVDIVELRPRNQLKPRPRPTPITPPVSRSLNPTPTCLSPSSCPSAIIADTDSLVKIDLRSPITPEAEDHSQECLSPVKEGRVIFYNVGDENGDVDDAKKESYFIFKGSCVNELKDKLKEETGLDDILVCCRNPFTAKLYPLRLQLPPHASDMHVVVVPSSFNGQFFLYLFYYSIFL 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g00936 317 FunFam BnaC05g19630D protein 5 144 - -
Vimu8g00936 317 Gene3D - 9 128 - -
Vimu8g00936 317 MobiDBLite consensus disorder prediction 155 169 - -
Vimu8g00936 317 Pfam Domain of unknown function (DUF569) 1 141 IPR007679 -
Vimu8g00936 317 MobiDBLite consensus disorder prediction 153 178 - -
Vimu8g00936 317 PANTHER ACTIN CROSS-LINKING PROTEIN (DUF569) 1 301 - -
Vimu8g00936 317 SUPERFAMILY Actin-crosslinking proteins 5 145 IPR008999 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g00936 Vimu-Chr8 16549888 16551056 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g00936 - - vum:124842942 607.831
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu8g00936 8 16549888 16551056 Vimu6g00817 6 9088658 9089626 PCT