Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g00817 ATGGAGGTGTTCGAAAAGGCACAGGTGGTGCGTCTGAGGAGTCGCCATGACAAATATCTGTTGGCAGACAATGACAAAGAGACTGTTTACCAAGATCGAAATGGGATATACAAAAATGCTAAATGGAGCGTGGAAATCGTGCAGGGTACAAACTGGATAAGACTCAAGAGTTGCTATGAAAGATACTTAACAGCCTCCAACATGCCCTTTTTGTTAGGAGCCACAGGTAAGAAAGTCATCCAGACCCTTCCCACAAGGTTAAACTCTTCTTTGGACTGGGAACCCGTAAGAGAAGGTGCATACGTCAGGCTTAAAACACGTTATGGACAGTTTCTTCGTGCCAACAAAGGCTTACCACCCTGGAAAAATTCTATCACTCACGATATCCCACAACGCACATCAACCACAAATTGGATCCTCTGGGATGTCGACCTTGTACAGCTTCGACCACAACAACCTCCCAAACCAATTTCGCTCCATCCTCCCGTCTCAGAATCTCCTTCTCATTCTCCACCCGATGATGCCTCCTTCAGTATATATCTCAAGTCTCCTTTAAATCAGGGTGAAGATTTTCTGGAGGCTGCGTCACCGATGAAAGATGTAAGGATTGTATTTTATAACGTGGAAAATGGAGATGCTTCTAATGAGAGTGAAGAAAAATTCTTCTCATTCCAAGGAAGTAGCGTGGAGGATTTGAAGGAGAAGTTAAAGGAAGAGACCGGGCATGATGATATTGTTGTGTGCTGCCGCAACCCGTTCAATGCCGAACTTCATCCTCTTCGTTTACAATTACCTCCTAACAACTCTGACATGCACGTTGTTGTAATTACTCCTTCCTGCAATGGTCAGCATTTCCTCTTTCCTCTTTCGTTTCTGCACAAATTTTCATAA 891 0.44 MEVFEKAQVVRLRSRHDKYLLADNDKETVYQDRNGIYKNAKWSVEIVQGTNWIRLKSCYERYLTASNMPFLLGATGKKVIQTLPTRLNSSLDWEPVREGAYVRLKTRYGQFLRANKGLPPWKNSITHDIPQRTSTTNWILWDVDLVQLRPQQPPKPISLHPPVSESPSHSPPDDASFSIYLKSPLNQGEDFLEAASPMKDVRIVFYNVENGDASNESEEKFFSFQGSSVEDLKEKLKEETGHDDIVVCCRNPFNAELHPLRLQLPPNNSDMHVVVITPSCNGQHFLFPLSFLHKFS 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g00817 296 MobiDBLite consensus disorder prediction 154 168 - -
Vimu6g00817 296 MobiDBLite consensus disorder prediction 152 177 - -
Vimu6g00817 296 FunFam BnaC05g19630D protein 5 144 - -
Vimu6g00817 296 PANTHER ACTIN CROSS-LINKING PROTEIN (DUF569) 1 278 - -
Vimu6g00817 296 Gene3D - 9 144 - -
Vimu6g00817 296 Pfam Domain of unknown function (DUF569) 1 141 IPR007679 -
Vimu6g00817 296 SUPERFAMILY Actin-crosslinking proteins 6 144 IPR008999 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g00817 Vimu-Chr6 9088658 9089626 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g00817 - - gmx:121172858 392.504
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g00817 6 9088658 9089626 Vimu6g00817 6 9088658 9089626 ECH
Vimu8g00936 8 16549888 16551056 Vimu6g00817 6 9088658 9089626 PCT