Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g00563 ATGGTTCTAGGCACGAGAGGAAAGAACAGAAGAGGTGTCACAGTTCAAATTGATTTCCTCATTCACATTCAGGAGATTAAACCTTGGCCCCCATCACAATCTCTAAGATCCCTGCGATCCGTGTTGATAGAGTGGAAAAATGGTGAATGTGCATCAGGTTCTACTACTCTTGTTGCACCCTCTCTTGGTTCAGTTATAGGTGAAGGAAGAATCGAATTCAACAAGTCATTTAGGCTACATGTGACTTTGTTGAGGGATATGTCTGCTAGAAGTGGTGATACTGATGTGTTCCAAAAGAATTGTTTGGAGTTCAACTTGTATGAGCCACGAAGAGATAGGACTATTAAGGGTCAGTTGTTGGGAACTGCAGTCATAGACTTGGCAGAATATGGGACACTCACAGAGTCCTTTAGCACTAGTGTTCCAATGAACTGCAAGAGGAGTTACAGGAACACAGAACAGCCACTTCTGTTCCTTAAAATTCAGCCTCTTGATATGAAGCGTGCTAGTTCCTCATCCAAGGACAATATTGGTGGTGACTCAGTGTCAACACTCATGAATGAAGAATATGCTGAAGAAGCTGAAATTGCCTCTTTTACTGATGATGATGTCTCCTCACATTCGTCTGCAGCTGCAGTTTCTCCTTCCCTTAACTCCAGAGGGTTTACCCCGCTGAAATTAGGAAAGAATGAACCAATTAGCAACACTGGTGTGAAAACCATGGAACATCCCGTGGCCTCGGAAACAAGGCTTGAAAACATGAATATGATGCAGAAAGATACACACAAGAAGCTTGAGAGGAGTTCTTACATGTCATCATTGGATGTATCTTCTATCAGGAGTCTAGAAAATGGTCATGCTTCTAACTCTGCTATTCACAATTCATTGTCAGTTAAAAAGTTTGCCGCTTCACCAAGTGCCAATACTTCTTCATCATCTTCAATTTTTGAGGATTTGGACATAAATTCTAGGAACAACACAAGAAGCAGTGGCCATGAAACTTTGGATCAGAGTTTTGAAGAAAAGCTTGCTAACTACAGAAATATAGTTGCAGATGTCCGAAGAAACACAAACGGAAGTACTTTTGGCATTTATTCAAAACAAACATCATCTCAAGATAGAGCTAAATTCACTGGCAAAAGTCCTGGCTTTGAAAACTGTGATGAAACTGAATATGGTGATGAATATTTAATGAAGGAGAGTGGAGGTGATAAAATTTGCCTTGGTTCTGTTGAGGACATAAGTGGAAATGAAAAATATGATTTGGATAGGCAAAACTGCATAGAGGATGAAAAATTTGAAGCACAAGATGCCAAGGATCAAGCCTCAATGGATAGCAATACATATTCTTTTGGAGGGTCAAATATTGCTATGCAGGAAAATAATCTCAGAAGTGAAAGACTAAAGATCATCAAGTCTGCGAGGATACCAGCAGACTCGACTAGGAGTACTGGTTCTCCTGGTAGCAATCATCATGCTGAATTACATGAAAATGGCATTCTTGGACATTCACAAAACAGTGGAGGGAACAGAAGCAATGAAAGAAGAAATTCTAAGATTCAAACAAAGGAAGCAAGAAATGGTACTTTAGATGGAAAAGTTGAGCAGTTGGAGAAGAAGATAAAGATGCTTGAGGGAGAGTTAAGAGAAGCTGCTGCAGTTGAGTCTGCTTTATATTCAGTAGTTTCTGAGCATGGAAACTCCACAAGTAAAGTTCACGCCCCAGCACGGCGCCTTTCCAGGCTCTATCTTCATGCTTGTAAAGAAAATGTTCAAGGAAGAAGGGCTGGAGCAGCTCAAAGTTCTGTTTCAGGATTAATACTTGTTGCAAAGGCATGTGGAAATGATGTCCCGAGGTTGACCTTTTGGCTGTCTAATGCTATAGCTTTGAGAACAATTATAAGCCGAACTGTCAAAGATCCTTCAAATCCTGCAGGAGCTGGTAGGAGAAGGAAAAGTGATGAGGAGGGGTATGGTAAGCTAAAAGCTTCCCTAAGGGTGAAGGGGTTATCCCCCAGAAAAGATGAAAATGCAGCATTGGGATATGGAGGTTTTGGTAACTGGGATGATCCCCAGGTACTCCTATTAGCACTGGAAAAGGTGGAAGCATGGATCTTTTCTCGCATTATAGAATCTATCTGGTGGCAGATTTTGATTCCACATATGCAGCACACAAAGTTCAACAGCAAAGAAGTGGTTTCAGACTCAAGAAAAAGCTACAGACGGACTTCTAGCTCATGTGATCAAGAGCAGGGTAACTTGTCTCTATATATTTGGAAGAATGCTTTTAGGGAAGCCTGTGAAAGGATCTGTCCTATTCGAGCTGGAGGGCATGAATGTGGCTGTTTGCCTATGCTTTCTAGATTGATAATGGAGCAATGTGTTGCGAGATTAGATGTGGCTATGTTCAATGCTATTCTTCGCGAATCTTCTGATGAAATACCAACTGATCCTGTATCTGATGCTGTTAGTGATCCCAAGATTGGGACCTGGTCAAGATGGTTGACTGACCTATTTGGAATGGATGATGATAATGATGATAATGATGACTCAATTGAAGATAAAGCTGAAACTGATAACAATGAACAAAAACAAAATGCATCCTTAAAGTCCTTCAGTCTTCTCAATGCTCTAAGTGACCTTCTGATGCTTCCTAAGGATATGCTGTTAAATGCATCCATCAGGAATGAGGTATGCCCTATGCTCAATGCAACACTTGTCAAGAAGATTCTGCACAATTTTGTCCCAGATGAGCTTTGTCCTGATCCTGTTCCCTCTAATGTCTTTGAGGCTCTGGACTCAGAGAGTGAGATGGAAGATGGAAAAGAGTCTGTGAACAACTTTCCATGCATTGCAGGTCCCATTGTATATTCAGCTCCAACACCATCTTCCATTGCAAGCATTGTGGGGGAGATGGGAAGCAAATATCATCTAAGAAGAAACAGATCATCAATTGTTAGGAAGTCACACACAAGTGATGATGAGTTGGAAGAATTGAAGTCTCCATTGTCTTCAATATTCTTGAGTGCTTCCTCATCCTCAAAACTTTCAACAAAATCCACCTTCAAGTTCAAACAAGTTAGCAACCAATCTCCTCTCAGATATGAACTCCTTAGGGAAGTGTGGATCAACAGTGAGTAA 3141 0.4097 MVLGTRGKNRRGVTVQIDFLIHIQEIKPWPPSQSLRSLRSVLIEWKNGECASGSTTLVAPSLGSVIGEGRIEFNKSFRLHVTLLRDMSARSGDTDVFQKNCLEFNLYEPRRDRTIKGQLLGTAVIDLAEYGTLTESFSTSVPMNCKRSYRNTEQPLLFLKIQPLDMKRASSSSKDNIGGDSVSTLMNEEYAEEAEIASFTDDDVSSHSSAAAVSPSLNSRGFTPLKLGKNEPISNTGVKTMEHPVASETRLENMNMMQKDTHKKLERSSYMSSLDVSSIRSLENGHASNSAIHNSLSVKKFAASPSANTSSSSSIFEDLDINSRNNTRSSGHETLDQSFEEKLANYRNIVADVRRNTNGSTFGIYSKQTSSQDRAKFTGKSPGFENCDETEYGDEYLMKESGGDKICLGSVEDISGNEKYDLDRQNCIEDEKFEAQDAKDQASMDSNTYSFGGSNIAMQENNLRSERLKIIKSARIPADSTRSTGSPGSNHHAELHENGILGHSQNSGGNRSNERRNSKIQTKEARNGTLDGKVEQLEKKIKMLEGELREAAAVESALYSVVSEHGNSTSKVHAPARRLSRLYLHACKENVQGRRAGAAQSSVSGLILVAKACGNDVPRLTFWLSNAIALRTIISRTVKDPSNPAGAGRRRKSDEEGYGKLKASLRVKGLSPRKDENAALGYGGFGNWDDPQVLLLALEKVEAWIFSRIIESIWWQILIPHMQHTKFNSKEVVSDSRKSYRRTSSSCDQEQGNLSLYIWKNAFREACERICPIRAGGHECGCLPMLSRLIMEQCVARLDVAMFNAILRESSDEIPTDPVSDAVSDPKIGTWSRWLTDLFGMDDDNDDNDDSIEDKAETDNNEQKQNASLKSFSLLNALSDLLMLPKDMLLNASIRNEVCPMLNATLVKKILHNFVPDELCPDPVPSNVFEALDSESEMEDGKESVNNFPCIAGPIVYSAPTPSSIASIVGEMGSKYHLRRNRSSIVRKSHTSDDELEELKSPLSSIFLSASSSSKLSTKSTFKFKQVSNQSPLRYELLREVWINSE 1046
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g00563 1046 Coils Coil 520 554 - -
Vimu8g00563 1046 MobiDBLite consensus disorder prediction 845 865 - -
Vimu8g00563 1046 MobiDBLite consensus disorder prediction 500 531 - -
Vimu8g00563 1046 MobiDBLite consensus disorder prediction 500 515 - -
Vimu8g00563 1046 MobiDBLite consensus disorder prediction 516 531 - -
Vimu8g00563 1046 MobiDBLite consensus disorder prediction 477 491 - -
Vimu8g00563 1046 MobiDBLite consensus disorder prediction 475 494 - -
Vimu8g00563 1046 PANTHER NUCLEAR PORE COMPLEX PROTEIN NUP205 518 1045 IPR021827 GO:0005643
Vimu8g00563 1046 ProSiteProfiles C2 NT-type domain profile. 7 165 IPR019448 -
Vimu8g00563 1046 Pfam N-terminal C2 in EEIG1 and EHBP1 proteins 16 140 IPR019448 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g00563 Vimu-Chr8 12064155 12070447 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g00563 - - vun:114181061 1789.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g03556 6 32794771 32800799 Vimu8g00563 8 12064155 12070447 PCT